Transcript Information: S_Transcript_230195.p1


Annotated TAIR IDAT1G77230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29016129-29017873 | Forward length=218
E-Value1.9E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5519316252913
Replicate 22.4178399515085
Replicate 33.2843228642028
Condition 2: 8 Hour
Replicate 13.7976722482566
Replicate 24.9034188799401
Replicate 32.627981211573
Condition 3: 24 Hour
Replicate 14.4886746898481
Replicate 25.4331055148778
Replicate 34.3188432200541


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_230195.p1 GENE.S_Transcript_230195~~S_Transcript_230195.p1 ORF type:5prime_partial len:146 (-),score=44.89,TPR_11|PF13414.2|2.6e-06,TPR_11|PF13414.2|0.00015,TPR_2|PF07719.13|0.12,TPR_2|PF07719.13|3.5,TPR_2|PF07719.13|2.6e-05,TPR_1|PF00515.24|50,TPR_1|PF00515.24|0.99,TPR_1|PF00515.24|3.1e-06,TPR_12|PF13424.2|0.00035,TPR_12|PF13424.2|0.0011,TPR_17|PF13431.2|1.5e+04,TPR_17|PF13431.2|4.4,TPR_17|PF13431.2|0.00012,TPR_17|PF13431.2|7.7e+02,TPR_16|PF13432.2|0.00073,TPR_16|PF13432.2|0.042,TPR_14|PF13428.2|9.4e+02,TPR_14|PF13428.2|0.15,TPR_14|PF13428.2|9.2e-05,TPR_8|PF13181.2|9.1e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|0.0002,TPR_19|PF14559.2|68,TPR_19|PF14559.2|0.00012 S_Transcript_230195:105-542(-)
CTTTTTTCCACCTCAATTGCAATTTTCAAGGATGGTAAATACCGTGAAGCACTTGGGAAGTGGGAGGCTGCTATTACTTTGATGCCTGAAAAGGCTGTTTCGCATGAACAGAAGGCTCAAGCACTACTTGAAATTGGGGATGCTTGGGGTGCTTTGAAGGCAGCAACTCGTGCCACTGAATTAGATCCGTCATGGGCTGAGGCTTGGACTACCCTTGGTAGGGCACAACTGAATTTTGGAGAGCCTGATAGTGCTATTGAAAGCTTTGACAAGGCGTTGGCTATTAAGCCTGAACTGGCCGAGGCAAAGAATGATAGACAAACTGCATCACAACTCATAAAGAAGAGAAAACAGCTTCATATGTCTGGTGTGAGTACAAATAAATCCCGTTTTGTGGTCGGTGATGGAGGCAAAAGCAACCTTCAGGATTGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_230195.p1 GENE.S_Transcript_230195~~S_Transcript_230195.p1 ORF type:5prime_partial len:146 (-),score=44.89,TPR_11|PF13414.2|2.6e-06,TPR_11|PF13414.2|0.00015,TPR_2|PF07719.13|0.12,TPR_2|PF07719.13|3.5,TPR_2|PF07719.13|2.6e-05,TPR_1|PF00515.24|50,TPR_1|PF00515.24|0.99,TPR_1|PF00515.24|3.1e-06,TPR_12|PF13424.2|0.00035,TPR_12|PF13424.2|0.0011,TPR_17|PF13431.2|1.5e+04,TPR_17|PF13431.2|4.4,TPR_17|PF13431.2|0.00012,TPR_17|PF13431.2|7.7e+02,TPR_16|PF13432.2|0.00073,TPR_16|PF13432.2|0.042,TPR_14|PF13428.2|9.4e+02,TPR_14|PF13428.2|0.15,TPR_14|PF13428.2|9.2e-05,TPR_8|PF13181.2|9.1e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|0.0002,TPR_19|PF14559.2|68,TPR_19|PF14559.2|0.00012 S_Transcript_230195:105-542(-)
LFSTSIAIFKDGKYREALGKWEAAITLMPEKAVSHEQKAQALLEIGDAWGALKAATRATELDPSWAEAWTTLGRAQLNFGEPDSAIESFDKALAIKPELAEAKNDRQTASQLIKKRKQLHMSGVSTNKSRFVVGDGGKSNLQDCA*

Click here to download the sequence:
Link to NCBI Protein BLAST