Transcript Information: S_Transcript_23037.p1


Annotated TAIR IDAT5G20220.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6822208-6825771 | Forward length=393
E-Value7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.351177900754
Replicate 228.05397810115
Replicate 329.412984271259
Condition 2: 8 Hour
Replicate 138.05479134178
Replicate 237.607849006437
Replicate 335.281402932383
Condition 3: 24 Hour
Replicate 125.893719654799
Replicate 229.111275214446
Replicate 331.744986923681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23037.p1 GENE.S_Transcript_23037~~S_Transcript_23037.p1 ORF type:5prime_partial len:232 (+),score=39.03,zf-CCHC_2|PF13696.2|9.5,zf-CCHC_2|PF13696.2|0.034,zf-CCHC_2|PF13696.2|0.00091,zf-CCHC_2|PF13696.2|0.0024,zf-CCHC_2|PF13696.2|0.00061,zf-CCHC_4|PF14392.2|0.033,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|0.061,zf-CCHC_4|PF14392.2|0.7,zf-CCHC_4|PF14392.2|0.61 S_Transcript_23037:2-697(+)
CTGTTCAGCAAGAGGATGAAGATCATACATCGCGATCCTGCTCTCCATGCGCAAAGGGTGGCTGCAATTAAGAAAGCTAAACAGAAACCTGCTGCAAGGAAACACGTGTCTGAAACTTTGAAAACCTTCTTTAGTGATCCTGAAAACCGTCGCAAGAGAAGCATCTCAATGAAAGGGGTCAAATTCTTCTGCAATAATTGCGGACGTGAAGGGCATAGGAGCTTTTACTGTCCTGAGCTTGCAAAAGGTGTGGATAGACGATTCAAGTGTGGGTTATGTGGAGAACATGGCCACAATAGAAGTACTTGCCAAAAGCCAATAACAAGCACTCCAAAACAAAGAGTTCTACAGCAGTATCACTGTCGTGTATGTGGGCAAGTTGGGCATAACCGGAGGACTTGTCCTGTGAAGACAGAAGTACAGTCAAGTGGTGCTCCAACACAAGTTGGAAACACACTAAAAGATTCGAAGGGCCATGTCCGAAAGCCTTATCAATGCCGTGTTTGTGGAGAAGGTGGTCATAACAAGAGGACTTGTCCCATCCAATTATCAAAGGGACAGTCAGATTTTGAGACGAAAGAACTTCGAAGCTCTTTGAATCCCAGCAGCAGGATTAGAAAGCCTTATAGGTGTAGTATATGTCATGCAAATGGCCATAACCGGAGAACTTGTGCTGAAAGGATGGCATTGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23037.p1 GENE.S_Transcript_23037~~S_Transcript_23037.p1 ORF type:5prime_partial len:232 (+),score=39.03,zf-CCHC_2|PF13696.2|9.5,zf-CCHC_2|PF13696.2|0.034,zf-CCHC_2|PF13696.2|0.00091,zf-CCHC_2|PF13696.2|0.0024,zf-CCHC_2|PF13696.2|0.00061,zf-CCHC_4|PF14392.2|0.033,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|0.061,zf-CCHC_4|PF14392.2|0.7,zf-CCHC_4|PF14392.2|0.61 S_Transcript_23037:2-697(+)
LFSKRMKIIHRDPALHAQRVAAIKKAKQKPAARKHVSETLKTFFSDPENRRKRSISMKGVKFFCNNCGREGHRSFYCPELAKGVDRRFKCGLCGEHGHNRSTCQKPITSTPKQRVLQQYHCRVCGQVGHNRRTCPVKTEVQSSGAPTQVGNTLKDSKGHVRKPYQCRVCGEGGHNKRTCPIQLSKGQSDFETKELRSSLNPSSRIRKPYRCSICHANGHNRRTCAERMALK*

Click here to download the sequence:
Link to NCBI Protein BLAST