Transcript Information: S_Transcript_23038.p1


Annotated TAIR IDAT5G20220.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6822208-6825771 | Forward length=393
E-Value1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.366746706981
Replicate 26.9671967023731
Replicate 36.4417212158031
Condition 2: 8 Hour
Replicate 19.7953945954295
Replicate 213.166207572662
Replicate 313.360650891161
Condition 3: 24 Hour
Replicate 14.4944018664859
Replicate 26.6147966801779
Replicate 34.7065058937776


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23038.p1 GENE.S_Transcript_23038~~S_Transcript_23038.p1 ORF type:complete len:209 (+),score=28.96,zf-CCHC_2|PF13696.2|7.2e+03,zf-CCHC_2|PF13696.2|5.1e+03,zf-CCHC_2|PF13696.2|8.3,zf-CCHC_2|PF13696.2|0.03,zf-CCHC_2|PF13696.2|0.0008,zf-CCHC_2|PF13696.2|0.0021,zf-CCHC_2|PF13696.2|0.00053,zf-CCHC_4|PF14392.2|0.095,zf-CCHC_4|PF14392.2|1.6,zf-CCHC_4|PF14392.2|0.053,zf-CCHC_4|PF14392.2|0.61,zf-CCHC_4|PF14392.2|0.53 S_Transcript_23038:943-1569(+)
ATGATTGTTTTTCACTACATCGATTATCATGTTTTGTTCTCTGAGAGGTTCCTCCTCTCTTCTGACAACAAATTTTTTTCCTTCTGGCATCTTTGCTCATCTGCAGGGGTCAAATTCTTCTGCAATAATTGCGGACGTGAAGGGCATAGGAGCTTTTACTGTCCTGAGCTTGCAAAAGGTGTGGATAGACGATTCAAGTGTGGGTTATGTGGAGAACATGGCCACAATAGAAGTACTTGCCAAAAGCCAATAACAAGCACTCCAAAACAAAGAGTTCTACAGCAGTATCACTGTCGTGTATGTGGGCAAGTTGGGCATAACCGGAGGACTTGTCCTGTGAAGACAGAAGTACAGTCAAGTGGTGCTCCAACACAAGTTGGAAACACACTAAAAGATTCGAAGGGCCATGTCCGAAAGCCTTATCAATGCCGTGTTTGTGGAGAAGGTGGTCATAACAAGAGGACTTGTCCCATCCAATTATCAAAGGGACAGTCAGATTTTGAGACGAAAGAACTTCGAAGCTCTTTGAATCCCAGCAGCAGGATTAGAAAGCCTTATAGGTGTAGTATATGTCATGCAAATGGCCATAACCGGAGAACTTGTGCTGAAAGGATGGCATTGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23038.p1 GENE.S_Transcript_23038~~S_Transcript_23038.p1 ORF type:complete len:209 (+),score=28.96,zf-CCHC_2|PF13696.2|7.2e+03,zf-CCHC_2|PF13696.2|5.1e+03,zf-CCHC_2|PF13696.2|8.3,zf-CCHC_2|PF13696.2|0.03,zf-CCHC_2|PF13696.2|0.0008,zf-CCHC_2|PF13696.2|0.0021,zf-CCHC_2|PF13696.2|0.00053,zf-CCHC_4|PF14392.2|0.095,zf-CCHC_4|PF14392.2|1.6,zf-CCHC_4|PF14392.2|0.053,zf-CCHC_4|PF14392.2|0.61,zf-CCHC_4|PF14392.2|0.53 S_Transcript_23038:943-1569(+)
MIVFHYIDYHVLFSERFLLSSDNKFFSFWHLCSSAGVKFFCNNCGREGHRSFYCPELAKGVDRRFKCGLCGEHGHNRSTCQKPITSTPKQRVLQQYHCRVCGQVGHNRRTCPVKTEVQSSGAPTQVGNTLKDSKGHVRKPYQCRVCGEGGHNKRTCPIQLSKGQSDFETKELRSSLNPSSRIRKPYRCSICHANGHNRRTCAERMALK*

Click here to download the sequence:
Link to NCBI Protein BLAST