Transcript Information: S_Transcript_23061.p1


Annotated TAIR IDAT1G50620.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18748537-18751005 | Forward length=629
E-Value1.9E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.219057634435
Replicate 23.5670378326521
Replicate 33.4897632349807
Condition 2: 8 Hour
Replicate 13.1413449209669
Replicate 23.4026644038866
Replicate 33.1399392280392
Condition 3: 24 Hour
Replicate 13.1132229166236
Replicate 23.3927861641239
Replicate 33.4434886972254


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23061.p1 GENE.S_Transcript_23061~~S_Transcript_23061.p1 ORF type:complete len:835 (+),score=198.52,PHD|PF00628.25|2e-07,PHD|PF00628.25|9e+03,BAH|PF01426.14|2.6e-06 S_Transcript_23061:190-2694(+)
ATGGACTCGTTACCAGAACCCGAATCCGAAGCTTCGAAGCGACAACGCCCGCCCGAAATCGGCGAAATCGAAGGTGAAATCGGAGGACAAGTGATGGAGAAGGCTTTTAAGAGGAGGAGGAAAGAGAATGGAGAGTTGGAGGTGAGGAGAGTGGCGGAGATAGTGCTGGTGTTGTCGGCGATGGGGAGGATGAGAGGAGGCAGAGATCCTACCGCCGTCGAGAAGGCCATGATGGCTGAGGCGAGGAAGAAAGTGGTGGCGTTGTGTGAGGAGTTGGCTCCTAAGGATATTTTGCCTCGAGAGGCGTTCGGCGTTGTGATTGAGGATTTAGGGCTTGATAAGTTGAAGGAGCAGCGGTTAGGGTTTGGCCCTCCTAGGATGTCAATTTCCGATAAGCTGGCCTATGCCAAGCGCAGGATGGAAGAATCCAAGGCATTTGCAGCTCAGCCTGCATCATATCCATCTCAACTTTTGCATAACACCGGGGCAGTTGGTGAGAACCGTGGGACACCACCAAATGTCCGCGCATACCCGTCTGAAAAAGCAGGTCATGTACCGGTTTCTTCAGGAAGTTTTCCGACTCCTGCTCCCATTGTACATGTTTCTACAGCAGCGTCTACACCTTTGCAATTTCGGCCTCCTGGCACTGAAGTTCGACCAGCAGTGGTTCCAGGTGCGGTGCCTAACAACATAGTACGGGATTCTCCCTCGATGGTTCCTCCTAGAGTGGATAGAGCACATATTAAACCTGATGGAAGACCGAACGGTCCTTCATTCGTGCCACATGGTCCAGTGAGCTCCTCAGCTGATCAACTTGTTGGGAGAGCTGCTCATATGCCTATGCAACCTCAACCTGCTCTGTGGTCTAATGATGGAACAAAAAGTAAGGTACCTGACCATCATCTTCCTGTGAGGGTTGGTGGTAACACTACTTCAATTTCTCCACAAAAGACCGCATCACCTGCCGTTGGTCAAACTCCTAAGCCAGTTGTGAGTCAGACTGCTTCCGTACCTCTACCTGGCATGCATCTTCCTGTGCAGGGCATGCAATTTGCTCAACCTTCTCCAGTTCCTACTAATCACCACCTAGAGATATCTAAGATGGTACAGAAGCTGCTGAATCCAAAGCTTCCTGAACGTCCTGCTTGGACCCCACCTTCAAGGGAGTACATGACGAGGGCAGTGTCATGTCAATTTTGCAAAGTGATCATTAATGGGGTTGAAAATGTGCTTGTTTGTGATGCTTGTGAGAAGGGTTTTCATTTGGGATGTCTTCAGTCATATAATGCAAAGAGCCTTCCTAAAGGTGAATGGCATTGCCCTAGGTGCTTGACAATGAATCGTGGCAAGCCCTTCCCTCCAAAATATGGCCGTGTTACCCGCAATATGAACGCTCCAAAAGGTTCCTCTAACACAGCTGGAGGTCATCTGTCTTCAGAGAAAAAGGTAGAAACTGTGGACGAGAAGGTGAATAAGCCAAATACAATGATGAATGGAAACTCAGACTTCAAAACTCACCCACAAGCTGGTAATTTAGCTGAATCATCGTCTGGCTCAAATCGTCAACATGGAAATGAGGTCAGTAAAATTGACATGCCTGCTGGCTTTAAAAAAGATGAAACTAGGTCAGAAAAGCATCCAAAAGAACCAGCAGGACCTGCTGTACACGCCTCTGTATCAACATCTGTTGGAGCTTCTTCTGAAAAACCTTCTCAACAGAAGGTGAAATCTGAAATATCTCTGTCAGAAGATAGATTTATATTTGGGGCAGAATCGACTACTCCAACTACACCACGTGTGAGTTCTACATCTGACCAGAAACCAATGGCCAGCAGTAAAAATGATGTAGGGCAGCATAGTTTGTCAAATGGTGGTGAAGTTCCAGTTCTTCAACATGGCAGTTGCAATGGAGTTGTGGAATGCAATAAACATTTTGAAGATGGAACATGTGAAAAAGATGCTGTGCAGAAAATTCCTAATGCAGCAGAGCGAGCTTGTGATCAGGCTAGAGCGCCTGTTGAGCCATCAGTGAATGGCATGCCTAAAATTGACTGGATTGGTGACACAGACAGAATTGTGGATGCAAATAAGTATTTTCAGTCGTGTTGCATAAGTGGAGTGGTATATAAAGTGCATGACTATGCCCTTTTTCGCTCAGACAATGGCAGGTTGATGCCTGTGAAGCTCCAGGCCATGTGGGAGGATAGCCAAACTAGTTTGAAATGGCTTTTGGTCCATAAGTGCTACTTTCCTGATGACTTGCCAGAAGAGGTTGGGCGGCCAGGCGCTTCTCAAAGCAATGAGGTCTACGAGTCTACTCATGATAGCAATGTGATGGCTGGTTTCATTGAAGGCCCATGTGAAGTCCTCCCATTTAGAAAATTTGGGGAAGAAATGGAGAGAGCTAATCAAGGTTCTCAGGCAAATGACAGAAAACAGCAAGTTTTCATACGCAATTGGTTCTATGATGAATCAAGACGAGCTTTCTGTCCGAATGCTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23061.p1 GENE.S_Transcript_23061~~S_Transcript_23061.p1 ORF type:complete len:835 (+),score=198.52,PHD|PF00628.25|2e-07,PHD|PF00628.25|9e+03,BAH|PF01426.14|2.6e-06 S_Transcript_23061:190-2694(+)
MDSLPEPESEASKRQRPPEIGEIEGEIGGQVMEKAFKRRRKENGELEVRRVAEIVLVLSAMGRMRGGRDPTAVEKAMMAEARKKVVALCEELAPKDILPREAFGVVIEDLGLDKLKEQRLGFGPPRMSISDKLAYAKRRMEESKAFAAQPASYPSQLLHNTGAVGENRGTPPNVRAYPSEKAGHVPVSSGSFPTPAPIVHVSTAASTPLQFRPPGTEVRPAVVPGAVPNNIVRDSPSMVPPRVDRAHIKPDGRPNGPSFVPHGPVSSSADQLVGRAAHMPMQPQPALWSNDGTKSKVPDHHLPVRVGGNTTSISPQKTASPAVGQTPKPVVSQTASVPLPGMHLPVQGMQFAQPSPVPTNHHLEISKMVQKLLNPKLPERPAWTPPSREYMTRAVSCQFCKVIINGVENVLVCDACEKGFHLGCLQSYNAKSLPKGEWHCPRCLTMNRGKPFPPKYGRVTRNMNAPKGSSNTAGGHLSSEKKVETVDEKVNKPNTMMNGNSDFKTHPQAGNLAESSSGSNRQHGNEVSKIDMPAGFKKDETRSEKHPKEPAGPAVHASVSTSVGASSEKPSQQKVKSEISLSEDRFIFGAESTTPTTPRVSSTSDQKPMASSKNDVGQHSLSNGGEVPVLQHGSCNGVVECNKHFEDGTCEKDAVQKIPNAAERACDQARAPVEPSVNGMPKIDWIGDTDRIVDANKYFQSCCISGVVYKVHDYALFRSDNGRLMPVKLQAMWEDSQTSLKWLLVHKCYFPDDLPEEVGRPGASQSNEVYESTHDSNVMAGFIEGPCEVLPFRKFGEEMERANQGSQANDRKQQVFIRNWFYDESRRAFCPNAC*

Click here to download the sequence:
Link to NCBI Protein BLAST