Transcript Information: S_Transcript_23172.p1


Annotated TAIR IDAT4G28025.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13935836-13937367 | Reverse length=157
E-Value4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.506425701802
Replicate 245.413917191381
Replicate 344.962582860749
Condition 2: 8 Hour
Replicate 136.580049084133
Replicate 239.191559660835
Replicate 333.296287499752
Condition 3: 24 Hour
Replicate 139.703474373416
Replicate 242.019037521111
Replicate 343.2640907679


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23172.p1 GENE.S_Transcript_23172~~S_Transcript_23172.p1 ORF type:complete len:137 (+),score=13.37 S_Transcript_23172:308-718(+)
ATGGCAACCCAAACGACTTTCCCTATCATCGGAGCCAATATCCAGTCTAAACCCCGCCAATTCGAATGGCACTTGACAGGAGGCCGACATCTAAGATCATACTCCAATACAACCAGGGGTCATGCAATTCGCGTGTTAGCAAACTCTAATGTTTCCTCAGGCAAGCCAATCTCAAACAAAGAAGTGATTATGGTAGATCCTTTGGAGGCCAAGAGATTAGCTGCCAAGCAAATGGCAGAGATTAAAGCGGAAGAAAAACTACAGAGAAGACGTCAAATTGAAGCAATAAACGGAGCATGGGCAATGCTTGGGCTCACGGCTGGCTTAGTCATCGAAGGTCATACAGGGCAGGGCATTCTGGGTCAGCTGGGTGGATATTGGCATGCGATTGTGAGTCTCTTTGTGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23172.p1 GENE.S_Transcript_23172~~S_Transcript_23172.p1 ORF type:complete len:137 (+),score=13.37 S_Transcript_23172:308-718(+)
MATQTTFPIIGANIQSKPRQFEWHLTGGRHLRSYSNTTRGHAIRVLANSNVSSGKPISNKEVIMVDPLEAKRLAAKQMAEIKAEEKLQRRRQIEAINGAWAMLGLTAGLVIEGHTGQGILGQLGGYWHAIVSLFVR*

Click here to download the sequence:
Link to NCBI Protein BLAST