Transcript Information: S_Transcript_231784.p1


Annotated TAIR IDAT1G77170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28998133-28999536 | Reverse length=467
E-Value7E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0600566529736
Replicate 20.69379841375833
Replicate 30.65728828809478
Condition 2: 8 Hour
Replicate 12.1012439096546
Replicate 22.0636506082767
Replicate 32.5024894462871
Condition 3: 24 Hour
Replicate 10.82433522606016
Replicate 20.71269847724363
Replicate 30.6873932437453


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_231784.p1 GENE.S_Transcript_231784~~S_Transcript_231784.p1 ORF type:complete len:477 (+),score=88.12,PPR|PF01535.16|0.29,PPR|PF01535.16|0.026,PPR|PF01535.16|0.023,PPR|PF01535.16|7.3e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0087,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.1,PPR_2|PF13041.2|0.007,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|9.7e-09,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.0008,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|4.2e+02,PPR_1|PF12854.3|9.7,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|6.6e+02 S_Transcript_231784:71-1501(+)
ATGATTTCCTTCCCCGTTCTACATGTAAGGCTCCACAAACTGCCACTACACAAATCCTCCATTCTTCTCTCACACAAATTCAATGCTCTCCTCCCACAAAACCCTGAATCGAATCAAAACTCTACACCCAATCAAACACCATCACAAACCCTCCAACAAAATCAAGGAGAGACCATTGCAAACTTGCTATCAAACTGCTCCAATCTTCCCCAGCTCCGTCAAATACATGCCCACATCATCAGAAACCACTTCTTAGAATTCAACAACGCCCCATTTCATTGGAACAACATTATACGTGCATACACTAGACTAAACTCACCATGCCAAGCTTTCTTAGTTTACTTAGCCATGTCAAGGTCAGGTGCATGGCCTGACCATTACACACTTCCCATTACTCTTAAGGCTGTAGGTCAAGTTTACTCCTTTAAGGCTAGCCAGCAGCTTCATGGGGTTGCTCTTCGTCATGGGCTTAATGGGCTTGAGTTTGTTGAAAGTGGGCTCATTAGTATGTACGTCAAAAATGGTGAGTTTGGCAATGCGTATAAGGTGTTCGATGAAAGTCCTGAGAGAAATTTGGGCTCTTGGAATGCCATTATGGCTGGCCTTTCACAAGGTGGGCGAGGGCGGGATACTGTGGATATGTTTGTGGCAATGTGTAGGAGTGGAGTTAAGCCTGATGGTGTGACTATGGTTAGTGTTACTTCGGCATGTGGATGTTTGGGGGACTTGAAGTTGGGGTTTCAGTTGCATAAGTTTGTGTTTCAAGTTAAGGTTAGAGGGAAAGAGGATATTTTGATGCTAAATTCACTTGTTGATATGTATGGGAAATGTGGGAGGATGGACTTGGCTTATGAGGTGTTCTCTAGGATGGATCAAAGGAATGTGTCGTCATGGACATCGATGATAGTGGGTTATGCTATGCATGGACAGGCAAGTGAAGCGATGGAGTGCTATCATGCTATGATAAAAGCTGATGTGATGCCGAATCATGTGACTTTTGTTGGGGTTCTGAGTGCTTGTGTGCATGGTGGGATGGTGGGTGAAGGGAAGCACTGCTTCCAAATGATGAAGGAAGATTATGCGATTGAGCCCCGATTGCAGCATTATGGATGTATGGTGGACTTGCTTGGCAGAGCAGGTTTGCTAGAGGAGGCGCGAAATATGGTTGAGCAGATGCCTATGAAGCCAAATGCAGTGGTTTGGGGCTGCTTGTTGAGTGCTTGTGAGAGGCATAGTCATGTGAAAATGGGAGAGTGGGTGGCCAAGAATTTCCTTGAGCTGGAACCTTGGAATGATGGCATTTATGTTGTTTTGTCAAACATCTATGCCAGTAATGATATGTGGAAAGAGGTTGAAAGGATAAGAGAGATTATGAAGCGGAGAAGATTGGCTAAACTTCAAGGATACAGTTTGGTGACAGATATATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_231784.p1 GENE.S_Transcript_231784~~S_Transcript_231784.p1 ORF type:complete len:477 (+),score=88.12,PPR|PF01535.16|0.29,PPR|PF01535.16|0.026,PPR|PF01535.16|0.023,PPR|PF01535.16|7.3e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0087,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.1,PPR_2|PF13041.2|0.007,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|9.7e-09,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.0008,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|4.2e+02,PPR_1|PF12854.3|9.7,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|6.6e+02 S_Transcript_231784:71-1501(+)
MISFPVLHVRLHKLPLHKSSILLSHKFNALLPQNPESNQNSTPNQTPSQTLQQNQGETIANLLSNCSNLPQLRQIHAHIIRNHFLEFNNAPFHWNNIIRAYTRLNSPCQAFLVYLAMSRSGAWPDHYTLPITLKAVGQVYSFKASQQLHGVALRHGLNGLEFVESGLISMYVKNGEFGNAYKVFDESPERNLGSWNAIMAGLSQGGRGRDTVDMFVAMCRSGVKPDGVTMVSVTSACGCLGDLKLGFQLHKFVFQVKVRGKEDILMLNSLVDMYGKCGRMDLAYEVFSRMDQRNVSSWTSMIVGYAMHGQASEAMECYHAMIKADVMPNHVTFVGVLSACVHGGMVGEGKHCFQMMKEDYAIEPRLQHYGCMVDLLGRAGLLEEARNMVEQMPMKPNAVVWGCLLSACERHSHVKMGEWVAKNFLELEPWNDGIYVVLSNIYASNDMWKEVERIREIMKRRRLAKLQGYSLVTDIS*

Click here to download the sequence:
Link to NCBI Protein BLAST