Transcript Information: S_Transcript_231803.p1


Annotated TAIR IDAT3G25230.2
Annotated Gene Namerotamase FKBP 1
Annotated Gene Symbol(s)ROF1, ATFKBP62, FKBP62
Annotation TypeOrtholog
Chromosome Positionchr3:9188257-9191175 | Forward length=562
E-Value1.3E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33687343335671
Replicate 21.7687468421636
Replicate 31.011626873784
Condition 2: 8 Hour
Replicate 10.62986384902924
Replicate 20.84956387239468
Replicate 31.079283423037
Condition 3: 24 Hour
Replicate 11.0138975459769
Replicate 21.1475347633594
Replicate 31.1706434112079


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_231803.p1 GENE.S_Transcript_231803~~S_Transcript_231803.p1 ORF type:complete len:237 (+),score=65.70,TPR_1|PF00515.24|0.28,TPR_1|PF00515.24|7e-05,TPR_1|PF00515.24|2.5e-07,TPR_1|PF00515.24|5.3e+02,TPR_11|PF13414.2|0.0015,TPR_11|PF13414.2|1.9e-10,TPR_11|PF13414.2|3.4e+03,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.0044,TPR_2|PF07719.13|0.00029,TPR_8|PF13181.2|14,TPR_8|PF13181.2|0.061,TPR_8|PF13181.2|8.3e-05,TPR_16|PF13432.2|0.18,TPR_16|PF13432.2|1.5e-05,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|2.5e-06,TPR_19|PF14559.2|24,FKBP_C|PF00254.24|1.2e-06,TPR_12|PF13424.2|0.0072,TPR_12|PF13424.2|0.00031,TPR_12|PF13424.2|2.3 S_Transcript_231803:1182-1892(+)
ATGAAGAAGGGTGAGATTGCGGTGGTGACAATTCATCCAGAATATGCATTTGGTTCATCAGAGTCACAACAAGAGTTGGCAACCGTACCTGCCAATGCAACGGTGCATTACGAAGTTGAGATGGTTTCATTCACAAAAGAGAAAGAGTCATGGGATATGAACACCCCTGAGAAGATTGAAGCCGCAAGCAAGAAGAAAGAAGAAGGAAACGCTTTGTTCAAAGCTGGAAAGTATGAAAGAGCATCAAAGAGATATGAGAAGGTTGTGAAGTTCATTGAGTATGATTCATCATTTAGCGAAGATGAGAAGAAGCAGGCTAAAGCTATGAAAATTACATGCAACCTCAACAATGCTGCCTGTAAGCTGAAATTGAAAGACTACAAGCAAGCTGAAAAGCTTTGCACCAAGGTGTTGGAGCTTGATAGGAACAATGTGAAGGCCCTATATAGGAGGGCACAAGCTTACATACATCTTGTGGACTTGGATTTAGCAGAGGTTGATATTAAGAAAGCCCTTGAGATCGACCCAGAGAACAGGGATGTAAAGATGGAATACAGGATCCTGAAGGAGAAAACCAGGGAATACAACAAGAGAGACGCACAATTCTATGGAAACGTGTTTGCAAAGATGAATAAATTGGAGCAAGTAAAATCAAACAAAGTACCGGCAAAACAAGAGCCTATGCCAATGGCTGTCGATAGCAAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_231803.p1 GENE.S_Transcript_231803~~S_Transcript_231803.p1 ORF type:complete len:237 (+),score=65.70,TPR_1|PF00515.24|0.28,TPR_1|PF00515.24|7e-05,TPR_1|PF00515.24|2.5e-07,TPR_1|PF00515.24|5.3e+02,TPR_11|PF13414.2|0.0015,TPR_11|PF13414.2|1.9e-10,TPR_11|PF13414.2|3.4e+03,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.0044,TPR_2|PF07719.13|0.00029,TPR_8|PF13181.2|14,TPR_8|PF13181.2|0.061,TPR_8|PF13181.2|8.3e-05,TPR_16|PF13432.2|0.18,TPR_16|PF13432.2|1.5e-05,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|2.5e-06,TPR_19|PF14559.2|24,FKBP_C|PF00254.24|1.2e-06,TPR_12|PF13424.2|0.0072,TPR_12|PF13424.2|0.00031,TPR_12|PF13424.2|2.3 S_Transcript_231803:1182-1892(+)
MKKGEIAVVTIHPEYAFGSSESQQELATVPANATVHYEVEMVSFTKEKESWDMNTPEKIEAASKKKEEGNALFKAGKYERASKRYEKVVKFIEYDSSFSEDEKKQAKAMKITCNLNNAACKLKLKDYKQAEKLCTKVLELDRNNVKALYRRAQAYIHLVDLDLAEVDIKKALEIDPENRDVKMEYRILKEKTREYNKRDAQFYGNVFAKMNKLEQVKSNKVPAKQEPMPMAVDSKA*

Click here to download the sequence:
Link to NCBI Protein BLAST