Transcript Information: S_Transcript_232188.p1


Annotated TAIR IDAT1G20300.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7029701-7031314 | Forward length=537
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9373449175036
Replicate 21.6061034543785
Replicate 32.6144874907786
Condition 2: 8 Hour
Replicate 14.0853238155427
Replicate 23.9429311778828
Replicate 34.5735151949385
Condition 3: 24 Hour
Replicate 12.4272092767327
Replicate 22.7787048675982
Replicate 34.4452645311699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232188.p1 GENE.S_Transcript_232188~~S_Transcript_232188.p1 ORF type:internal len:261 (-),score=41.82,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|0.55,PPR_2|PF13041.2|0.00033,PPR|PF01535.16|3.1,PPR|PF01535.16|7.4e+02,PPR|PF01535.16|6.4,PPR|PF01535.16|0.0001,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00019,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.032 S_Transcript_232188:2-781(-)
TTTTTTTTTGCATCAATGGCAGTTTCAACTACAAGAAGGACCTTAATTAAACTCCCAATTTTCCTTCCTTCCATCTCTAAAACCCTTGTCTCATTCTCCACCTCATCATCATCATCATCATCAACCAAACCATTACTTCCAACACTCCAACCCTGCCATGATGCAGAACTAATCTCCAACATTCTAATCCAACACCACAACCCCTTTCATGCAATGGAATCTTCCCTCCAAATTCATGGCATTTCCCTTTCTTCTCACCTTCTTCACCAAACCCTTCTTAGACTTTCCCACTTTTCCAAAATTGCCCTTTCCTTCTTCTCATGGGCTCTACAGAACAACCACCCCACCACCACCAATACAAATGCCATTGATGTTAATTGCTTCAATTTAATGATTGACATTTTGGGTAAAGTTCATCAATTTGATGTTTCTTGGCAACTCATTATCCAAATGCAAACCCTCAATTTAAAGCATCAAGCTTCCACCTTTTTGATCTTGACCCGCCGTTTGATCGCTTCCGGGTTGACCCGGAAAGCAATTCGGGCATTTGATGATATACCCACCTTTACTGAGTGTGAACCCAGTAAAGATGATGTCTTGTATTTGCTTGATACTTTGTGTAAATATGGGTATATCAAGGTTGCAATGGAGGTTTTTAATAAGAGGAAAATGATGGGTTTTGATTTGTGTGTTAAAGTTTATACTGTTTTGATGAGTGGGTGGTGTAAAGTTAAGAGGGTTGATATGGGGGAAAAGTTGTTGAGGGAGATGCTGGATAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232188.p1 GENE.S_Transcript_232188~~S_Transcript_232188.p1 ORF type:internal len:261 (-),score=41.82,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|0.55,PPR_2|PF13041.2|0.00033,PPR|PF01535.16|3.1,PPR|PF01535.16|7.4e+02,PPR|PF01535.16|6.4,PPR|PF01535.16|0.0001,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00019,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.032 S_Transcript_232188:2-781(-)
FFFASMAVSTTRRTLIKLPIFLPSISKTLVSFSTSSSSSSSTKPLLPTLQPCHDAELISNILIQHHNPFHAMESSLQIHGISLSSHLLHQTLLRLSHFSKIALSFFSWALQNNHPTTTNTNAIDVNCFNLMIDILGKVHQFDVSWQLIIQMQTLNLKHQASTFLILTRRLIASGLTRKAIRAFDDIPTFTECEPSKDDVLYLLDTLCKYGYIKVAMEVFNKRKMMGFDLCVKVYTVLMSGWCKVKRVDMGEKLLREMLDK

Click here to download the sequence:
Link to NCBI Protein BLAST