Transcript Information: S_Transcript_232512.p1


Annotated TAIR IDAT1G20370.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7051846-7053588 | Reverse length=549
E-Value2E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0411151389814
Replicate 21.5619674023019
Replicate 31.0880670255811
Condition 2: 8 Hour
Replicate 11.1323216097593
Replicate 21.3858667298946
Replicate 30.94317909756555
Condition 3: 24 Hour
Replicate 11.4821012397748
Replicate 20.86911371826701
Replicate 31.1904209748727


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232512.p1 GENE.S_Transcript_232512~~S_Transcript_232512.p1 ORF type:5prime_partial len:339 (-),score=76.08,PseudoU_synth_1|PF01416.16|1.5e-10 S_Transcript_232512:201-1217(-)
GTTCAGTCAGACATTTCTTCGAACAGTGAGAGTGCATCTTTCCATACTATTGAGAAAGGGAGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGATAATGGGGTGGGAAATAATGTGATTGTTGAAGGCTCTAAGGTTTTAGCTCAGTGTGGCATTTCGTCGAACAGTGAAGCTGCATTGTTAAGTACTGAAGATAGTGAGAAGCAGAAGGAAGAATGTGATGTTAATGTAGGGAATAATTGTGCTGCTGCTAATTTAGATGTTAATGCTGTTAATTCTGAATCGATGGTCGTGGACGAGGTATGTGAAGGAGATTCAAATGGGTGTGGCAATGTAGAGGAGGAGGAGAAGGTGAAGGAAAGTAGTGACTTCAAGTATAGGGATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAACTTCACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACTACTCTCACGGTTGAAGGGATCGATTTTATCAAGTGTGAGGTTGTTGGACAAAGTTTCATGCTTCAACAGATTCGGAAAATGATGGGGCTCGCAGTAGAGATAATGAGGAATTTCGCTCCTGAATCAATCTTTGAGAGATCATTTGAACCGGATGTTCGTATCAATGTGCCTACAGCCCCAGAGGTGGGCTTGTACTTGGACGGATGTCTCTTCACTTCGTATAACAATAAATGGAAAGCCTCGCATGAGGAACTGTCCATGAAAGACTATGCTGAAGAGGCGGAAGAATTCAAATTGAAGTACATATACTCCCACGTTGCTAAAACTGAGCACAAGGAAGCAGCTGTCGCAGTTTGGCTACACTCCTTAAACCACCGGAACTACCCTGATCTTCAGCCTCAACCTGTGGATGGTGATACAGGGGTCGCCATTGAGAGCAAGAGCACTGAAGCTGAGACGCTGGCTGAAGGAGATTCAACAACTGTGCCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232512.p1 GENE.S_Transcript_232512~~S_Transcript_232512.p1 ORF type:5prime_partial len:339 (-),score=76.08,PseudoU_synth_1|PF01416.16|1.5e-10 S_Transcript_232512:201-1217(-)
VQSDISSNSESASFHTIEKGRDQMHCDVSLDGNDNGVGNNVIVEGSKVLAQCGISSNSEAALLSTEDSEKQKEECDVNVGNNCAAANLDVNAVNSESMVVDEVCEGDSNGCGNVEEEEKVKESSDFKYRDEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANTTLTVEGIDFIKCEVVGQSFMLQQIRKMMGLAVEIMRNFAPESIFERSFEPDVRINVPTAPEVGLYLDGCLFTSYNNKWKASHEELSMKDYAEEAEEFKLKYIYSHVAKTEHKEAAVAVWLHSLNHRNYPDLQPQPVDGDTGVAIESKSTEAETLAEGDSTTVPA*

Click here to download the sequence:
Link to NCBI Protein BLAST