Transcript Information: S_Transcript_232533.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeHomolog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43867584453594
Replicate 20.60612059223942
Replicate 30.20266742949012
Condition 2: 8 Hour
Replicate 10.23434494853992
Replicate 20.49168898109289
Replicate 30.23424008357122
Condition 3: 24 Hour
Replicate 10.1200268323659
Replicate 20
Replicate 31.5244092772323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232533.p1 GENE.S_Transcript_232533~~S_Transcript_232533.p1 ORF type:complete len:182 (+),score=17.61,MatE|PF01554.14|8e-24,MatE|PF01554.14|7.6e+02 S_Transcript_232533:90-635(+)
ATGTGCGTCAACACAGAAGCTATTGCCTTTAATTTCACCTATGGCCTCAGTGCTGCAGTGAGCACAAGGGTGTCGAACGAGCTTGGTGCCACAAGACCCGAAAAAGCCAAGCAAGCTATGGGTGTAACGTTGAAGTTATCGGTGGTCCTAACTTGTGCTATTCTTGTAGCTCTAGGCTTTGGTCATGAGCTTTGGGCAAGCTTGTTTAGTGATAGCCCCAACATTATCAAGGCATTCTCCTCTATGACTCCTTTGCTTTGCATTTCCATAGTCTTCGATTCAATTCAAGGCATCTTACCAGGAGTCTGTAGGGGATGTGGTTGGCAGCACTTGGCAATGTTCATAAATCTTGGCACATTCTATGGCATTGGCATGCCCATTGCGGTCGTTTTTGGTTTAGTGCTCAAATTCTATGCTAAGGGTCTCTGGATTGGCTTAATCTCTGGCCTCGGAACTCAGTCCTTTGCTCTTTTCCTCCTGACCTGCTTCAAGAAATGGATAGCACACTTGAGTTTTCTAGCCATAAATCTGAAACTTCAGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232533.p1 GENE.S_Transcript_232533~~S_Transcript_232533.p1 ORF type:complete len:182 (+),score=17.61,MatE|PF01554.14|8e-24,MatE|PF01554.14|7.6e+02 S_Transcript_232533:90-635(+)
MCVNTEAIAFNFTYGLSAAVSTRVSNELGATRPEKAKQAMGVTLKLSVVLTCAILVALGFGHELWASLFSDSPNIIKAFSSMTPLLCISIVFDSIQGILPGVCRGCGWQHLAMFINLGTFYGIGMPIAVVFGLVLKFYAKGLWIGLISGLGTQSFALFLLTCFKKWIAHLSFLAINLKLQN*

Click here to download the sequence:
Link to NCBI Protein BLAST