Transcript Information: S_Transcript_232583.p1


Annotated TAIR IDAT3G10650.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3325562-3330819 | Reverse length=1309
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7395736565627
Replicate 24.2178862389367
Replicate 33.3902088388972
Condition 2: 8 Hour
Replicate 13.6064998330446
Replicate 24.2769710634772
Replicate 33.1346834713208
Condition 3: 24 Hour
Replicate 13.8549794395166
Replicate 23.3329134671099
Replicate 33.709124177223


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232583.p1 GENE.S_Transcript_232583~~S_Transcript_232583.p1 ORF type:internal len:136 (-),score=34.59 S_Transcript_232583:3-407(-)
CCGGAACTCTCAACTTCTTTTAGTCAGATTTCTCATATTCATTCATTGTCTAAAGTGACTGCAGATAATAGCAGACCTAGTACTAGTGGTGGTTATGTTCCTTCTCAATCTATTGAGATGGCGGAAAAGATCTTTCAGCAACTTGACAAAATCACTCCAAAGGGAAAATCCTCAGAGTTGAAAATCGACATTGCAGGTGAGAATTCACCTGCTAAGATGACACCCAAAATGCTAGGTGGACTGGCTCGTAGAAGCATGGAGACTGTAGATTCCATGAAGGTCTTGCAAAGTATTCGAGATAGTAAGAGAGAAAATGGTCAAGTGGACTCTGTTGATACATGTTTTATTCCACCTAAGATATCATCTAAGGTGGAAGAAACTAGCATGAAAAAGTTTGAGGTTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232583.p1 GENE.S_Transcript_232583~~S_Transcript_232583.p1 ORF type:internal len:136 (-),score=34.59 S_Transcript_232583:3-407(-)
PELSTSFSQISHIHSLSKVTADNSRPSTSGGYVPSQSIEMAEKIFQQLDKITPKGKSSELKIDIAGENSPAKMTPKMLGGLARRSMETVDSMKVLQSIRDSKRENGQVDSVDTCFIPPKISSKVEETSMKKFEVS

Click here to download the sequence:
Link to NCBI Protein BLAST