Transcript Information: S_Transcript_232589.p1


Annotated TAIR IDAT3G10650.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3325562-3330819 | Reverse length=1309
E-Value6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2553390877272
Replicate 22.4306463071838
Replicate 32.0318268566679
Condition 2: 8 Hour
Replicate 12.3494074078197
Replicate 21.9907153450604
Replicate 32.4386774802309
Condition 3: 24 Hour
Replicate 11.8512613127622
Replicate 22.4008274974944
Replicate 31.8168421817245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232589.p1 GENE.S_Transcript_232589~~S_Transcript_232589.p1 ORF type:internal len:236 (-),score=66.29 S_Transcript_232589:2-706(-)
AATGATGCAAGTAGAATGTCTGACAGTAATGGGGTTTCTGAACTTGAGGACATATTGAAGCAGAAGACCTTTACAAGGTCTGAGATAGATCATTTAACTGCGTTGCTGCTCTCAAGAACAGTTGATGGTTCGGTTGGTGCTGGGAAAGGAAGGTCTGAACCAAGTTTTCAAGGCCAGTGGGCTATTCACGATAGACACAGTAATGAGACTGATCTTGTTGTTCATGAAAATGAAATAGATCATGGGGCTCCTGGAGTAATCACAACTCCTACATTGAGATCAAAAGTTGTTGAAGAGGATGTTGCTTCACCTGCTGAACTTGCCAAAGCCTACATGGGTAGGAGGCCTACAAGAGTATCCCCATCAGTGTTGAGTTTGCAAAACCAAATGCCCCGGGAAGACTTATCTGCTTCTCATAATCCACCTTTTAAGCTGAGGTCCCCAGGAACTTCTCTTCTTCAGAAGCCTGTCAGTGATATTGGAACCTCTGAAAATGGTTTTGTGACTCCAAGATTTCGAGGAAGATCTGCAATATACAGCATGGCTCGTACTCCATATTCTAGGATTCATCCAGCAACATCGTTAAAGGCTGCTGAAAATGCTTTTGATGCTTGTGCTGGATCATCATCATCTCAAAATAAGACAGAGAATAATCTGTTTAACGGCTCTAGGAAACAGGTTCTCAAGCGTAGGAGTTCTGTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232589.p1 GENE.S_Transcript_232589~~S_Transcript_232589.p1 ORF type:internal len:236 (-),score=66.29 S_Transcript_232589:2-706(-)
NDASRMSDSNGVSELEDILKQKTFTRSEIDHLTALLLSRTVDGSVGAGKGRSEPSFQGQWAIHDRHSNETDLVVHENEIDHGAPGVITTPTLRSKVVEEDVASPAELAKAYMGRRPTRVSPSVLSLQNQMPREDLSASHNPPFKLRSPGTSLLQKPVSDIGTSENGFVTPRFRGRSAIYSMARTPYSRIHPATSLKAAENAFDACAGSSSSQNKTENNLFNGSRKQVLKRRSSVL

Click here to download the sequence:
Link to NCBI Protein BLAST