Transcript Information: S_Transcript_232679.p1


Annotated TAIR IDAT1G18060.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6212065-6213314 | Reverse length=226
E-Value4.4E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.13815690619
Replicate 211.893222495848
Replicate 313.976135938354
Condition 2: 8 Hour
Replicate 115.161019678587
Replicate 218.00234695228
Replicate 317.152596119633
Condition 3: 24 Hour
Replicate 119.626262511081
Replicate 213.633699151397
Replicate 314.384447199793


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232679.p1 GENE.S_Transcript_232679~~S_Transcript_232679.p1 ORF type:5prime_partial len:128 (-),score=5.54 S_Transcript_232679:220-603(-)
AGAGGAAGTGGGGTAATGGTATTGGACTATTGGTATGGCCTGGTATACGTTCTCAGGTCGTTAATTTACTACTCTAAAGTCTTGAATTTACAGGCCAAACGGATTGAAAATGGCGTGTATCTGGGACCTCTAGGATGCTTGACATTTGAAGGTGGATTTTCCTTGAAAAAAAGAATATTGGCATTCATTTTTGAGCGCATTCGTATTAAAATCGGACCCTTGCAGCCTTTAGAGGTAAGTCTAGGAAATGAAGACAAAAGGGAGCCAAACACCAAAGATCCATTTTTCATATGGTTTTATGTTGATGAGGAAATAGCAGTGGCCCGTGGGAGAAGTGGAGGAACAGCATTTTGGTGCCGTTGTCGCCGAGTGAATAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232679.p1 GENE.S_Transcript_232679~~S_Transcript_232679.p1 ORF type:5prime_partial len:128 (-),score=5.54 S_Transcript_232679:220-603(-)
RGSGVMVLDYWYGLVYVLRSLIYYSKVLNLQAKRIENGVYLGPLGCLTFEGGFSLKKRILAFIFERIRIKIGPLQPLEVSLGNEDKREPNTKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNNS*

Click here to download the sequence:
Link to NCBI Protein BLAST