Transcript Information: S_Transcript_23270.p1


Annotated TAIR IDAT1G67230.1
Annotated Gene Namelittle nuclei1
Annotated Gene Symbol(s)LINC1
Annotation TypeHomolog
Chromosome Positionchr1:25151561-25156032 | Reverse length=1132
E-Value5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.224343730353
Replicate 29.9333861821741
Replicate 39.1613219243188
Condition 2: 8 Hour
Replicate 18.7682069955096
Replicate 28.3244087961773
Replicate 37.5745616605608
Condition 3: 24 Hour
Replicate 19.4695029828994
Replicate 28.4541287833631
Replicate 39.7838069924962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23270.p1 GENE.S_Transcript_23270~~S_Transcript_23270.p1 ORF type:complete len:1075 (+),score=371.55 S_Transcript_23270:1611-4835(+)
ATGCGTGAAGAACATACAAAAATTAAGGATTCATCTGAAGGATCTGTGGCTGATGTTAATGCTCGTATTGAAATGTTGGAGCAAAGAAGCCTGGAGTTGGAAGGCAAGTCTCATTCAGTGAATGCAAGACTTGCTGAGGCAGACAGAAAGACATCCGAGTTAGACAGACAACTGCAAGATTTGGAAACTCGTGAAAGCATTCTGAAGAGGGAGCGTCTAACATTAACCCAAGAACGAGAAGCCCATGAGTCATATTTCCGGAGACAGAAGGAAGATTTGCTCGAGTGGGAGAGAAAACTGCAAGAAGCAGAGCAGAGGCTTTGTGACAGTCGGAGAACCCTTAATGAGCGGGAAGAGAAACTACATGAAACTGATAGGACTTGCAAGCAAAAGGAGATTAAGCTTCAAGAGCTGCAACAGAAGATTGATTTGGCTAATGCCACTTTGAAAAAGATGGAAAGCGAGATAAACAATCAATCAGCGGAATTGGAGTTGAAAGAGAAGAAAGCTGAAGCTCTGAGATGTGACCTAGAGGTGAGGGAGAATCAACTGAAGGAGAAGGAAGAAGGGCTTAATGCAAGAGAAACAGTGGAGTTGCAGAAGCTCCTTAATGAGCACAAGTCTAAACTTGATGCCAAAATGCATGAATTTGAGTTTGAGATGAAGCATAAAAGAAAATCTGTTGAGGAGGAATTGAAAAGCTATAGAGAAGATGTGTGTCAGAAGGAAAGTGAAATTAATCATCTTGAGATGAAACTTGGCAAACGGGAACAAGCACTGGAGAAAAAGGCTGAGAGGGTCAAAGAGAAAGAGAAGGACGTTGAAGCAAAGGCGAAAACCTTGAAGGAGCAAGAAAAATGTCTCAAAGCGGAAGAGAAAAAACTGGAGGCAGAGAAGAAACAACTGAACACTGAGAAAGAGCGCCTGGAGAATTTAAAAGATGAGATTGAAGGATTGAGGACTGAAATGAGGAAACAGCAACTGCAAATTGAAGAAGAGAGAACAAAGCTTACAAATGCAGAAGAAGAGAGGTTAGAGTATCTTCGTCTGCAGTCATGTTTAAAGCAGGAGACGGAGAATGTTAGGCGTCAGAGCGAGGTAGTTGTGAAGGAAGCTGAGGATCTGAGGCTGGAACGAGAGAAGTTTGAGAAAGATTGGGAGGCATTGGATGACAAACGAGCTGGCGTGGATAATGAGCTTAAGACGCTTGCTGAAGAGAAAACAAGATTTGAGAAGTTACGGAACTCAGAGGAAGAGAGTTTGAAAAAGAAGTATATGGAGGCCGAACAGTATATTCAGCAGGAGAGGGAGAGCCTCAGACTAGAAAAAGAATCGTTTGAAGCCACCATGAAGCATGAGAAGCTAATGTTATCTAAAAAGGCTGAAAATGAGCACAGCCTAATGCATCAAGATTATGAACAGCGGAGACAGAAACTTCATCATGATATGCAGAAGAGACAGAATGAATGGGAGAAGATGGTAGAGGAAAAGGAGAGAGCGTTTGAAGAAATGAGGTTGAGAGAAATGAGAAACATCAATCACTTGAAGGAAAATGCTGAGAAAAAGAAGGAAGAAATGGAAACTGAAAGGCGACGGATGGAAAAAGAAATGCGGGAACTAGAAGTCAACAAGCAGCAACTTGAAGAGACCAGTATTGATATATCCAAAGATATTGAGGCTCTTGATAAACTTAGTAAAAAGCTGAAGAACCAGCGGGAAGAGTTGATCGCTGAAAGAGCCAATTTTGGTGCTCTCATTGAGAAGATTAAGAGGTGCAATAATTGTGGAGATTTTGCGCAGACATTTCTCCTTCACGATCTCCAGCTACCCACTGTGGATGGCTCTAATCATTTGCCTGGACATTCTCATGATGATCAGAAGGATGCCAAACATGATCAGAAGGTATCTTCAGTGGGACTTAGTGGAGGTTCTTCTGAGTTTGGAGGGAAGAGAAGCATTTTTCGAAGATGTGCATCAATCATCTTTCGTTCACCCCCAAATAAAGGGATTCAAGATGCTGATGATCATATTGTGCAAGAATCTCCGAAGTCTGCTGTGCATGTTCGTGCTGATGAAGTAATTGCAGGGGCACCTACTCCTGGTCATGATGAGCCAGGACCATCATTTGTAGTAAACGACTCTTTGAAGAATTTGCAGCGAGATGTTAGTGTTAAAGGAGATAATGTTGACCATGCTCCTTCTGTTGATGACTCCAATATTGGCAGCGAAATTCAAGACATTCAGGAGCCTGAGATGTCTGATGTGAAGAGTGGCAGGCGGAAACCTGGACGAAAACGTGGGTCTGGAGTTCGGAGGACGCGTTCTGTTAAAGCAGTGGTTGAGGAAGCCAAGGCTTTTCTTGGGGAGAGCTCCGAGGGAAAGATGGCGGAACAACTAAATGGTTCAGCAGGTGCCAATGCAAGGAACCTAGAAATAGTGCACGCTGACATGGCTCTTGCCTCTGGTGCCCGTAAGCGGAGTCATTCACAGGCCTCTAGAATGACAGAAAGTGAACAGGATATTGATTATAGTGATGGAAGGGCTGATAGTGTCACAACTGGTGGTCGCAGGAAAAGGAGACAGACTGTTTCCTCTGCCTTAACGACTCCTCGTCAGAGGCGTTACAATCTTAGGCATCATACAACTGCAGCAACAGCCAGTGCAGGACAAGAGGCAAGTCTCAAGACCAAGAAAGAAGGTGGAGCTTCTGATGAAGATGGTGCTAATCAACCTGCGCCAAACCCTGAAACAGCACCCTCCCAATCATTGGATGTCACTGCCGAAAGTGACAGAAGATACCATTTGGTACAAGTTTCCACCACTAGAAGTGTCGAGTTTTCGTCTGATAAGATTGTCAGGTTTGATACAGCAGTCAAGGTAGTTGACAGCAATGTTGATGCTACAAAATCAGCAGAGAACACTTTGTTGAGCGGAGAAGTAAAATCAGCTGAAAATATGGCGTTAAGTGAAGAGGTCAATGGGACTTCAGAAAATGTCGAGGAAGATGATAATGACAGCATATTTCATGAAAATGAGGACGACAATGATCGCGAAGATGAGGCAGGCGAAGATGATGACGACGACGACGATGATGAGAATCAAGTAGTGCCTTGGACATCAACACCTGTAGAATCCACTACTGCTAGTGGTTCCACCAGCAGTGAAGCAGAGGAGCTCTTGTTTTCATCTTCTTCATTAAAGCGTAAGAGGGAGATTTCCTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23270.p1 GENE.S_Transcript_23270~~S_Transcript_23270.p1 ORF type:complete len:1075 (+),score=371.55 S_Transcript_23270:1611-4835(+)
MREEHTKIKDSSEGSVADVNARIEMLEQRSLELEGKSHSVNARLAEADRKTSELDRQLQDLETRESILKRERLTLTQEREAHESYFRRQKEDLLEWERKLQEAEQRLCDSRRTLNEREEKLHETDRTCKQKEIKLQELQQKIDLANATLKKMESEINNQSAELELKEKKAEALRCDLEVRENQLKEKEEGLNARETVELQKLLNEHKSKLDAKMHEFEFEMKHKRKSVEEELKSYREDVCQKESEINHLEMKLGKREQALEKKAERVKEKEKDVEAKAKTLKEQEKCLKAEEKKLEAEKKQLNTEKERLENLKDEIEGLRTEMRKQQLQIEEERTKLTNAEEERLEYLRLQSCLKQETENVRRQSEVVVKEAEDLRLEREKFEKDWEALDDKRAGVDNELKTLAEEKTRFEKLRNSEEESLKKKYMEAEQYIQQERESLRLEKESFEATMKHEKLMLSKKAENEHSLMHQDYEQRRQKLHHDMQKRQNEWEKMVEEKERAFEEMRLREMRNINHLKENAEKKKEEMETERRRMEKEMRELEVNKQQLEETSIDISKDIEALDKLSKKLKNQREELIAERANFGALIEKIKRCNNCGDFAQTFLLHDLQLPTVDGSNHLPGHSHDDQKDAKHDQKVSSVGLSGGSSEFGGKRSIFRRCASIIFRSPPNKGIQDADDHIVQESPKSAVHVRADEVIAGAPTPGHDEPGPSFVVNDSLKNLQRDVSVKGDNVDHAPSVDDSNIGSEIQDIQEPEMSDVKSGRRKPGRKRGSGVRRTRSVKAVVEEAKAFLGESSEGKMAEQLNGSAGANARNLEIVHADMALASGARKRSHSQASRMTESEQDIDYSDGRADSVTTGGRRKRRQTVSSALTTPRQRRYNLRHHTTAATASAGQEASLKTKKEGGASDEDGANQPAPNPETAPSQSLDVTAESDRRYHLVQVSTTRSVEFSSDKIVRFDTAVKVVDSNVDATKSAENTLLSGEVKSAENMALSEEVNGTSENVEEDDNDSIFHENEDDNDREDEAGEDDDDDDDDENQVVPWTSTPVESTTASGSTSSEAEELLFSSSSLKRKREISY*

Click here to download the sequence:
Link to NCBI Protein BLAST