Transcript Information: S_Transcript_23273.p1


Annotated TAIR IDAT1G13220.2
Annotated Gene Namenuclear matrix constituent protein-related
Annotated Gene Symbol(s)LINC2
Annotation TypeHomolog
Chromosome Positionchr1:4515699-4520071 | Forward length=1128
E-Value7E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3912672321227
Replicate 24.7842579524219
Replicate 35.952743006133
Condition 2: 8 Hour
Replicate 18.5016985584567
Replicate 29.1427905199884
Replicate 39.5290194464304
Condition 3: 24 Hour
Replicate 15.5204334425772
Replicate 25.8218965517223
Replicate 35.9531597720166


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23273.p1 GENE.S_Transcript_23273~~S_Transcript_23273.p1 ORF type:3prime_partial len:1199 (+),score=401.24 S_Transcript_23273:278-3871(+)
ATGTTCACACCTCAAAGAAAAGCGCCATGGACTCCAGCCACCTCCACTCCAAGAACCGACTCCAGGATCACCCCCTTGGCCGCTTCCAAAGGCAAGGCCGTTGCCTATATCGATGGCCCGCCGGCACCACCTCCCCCATTGGGCTATTTGGGCTCCGACAGTTTAGGCCAGGCTTTAACGGGCCGTAATTCCGACGACTGGAAGAAGTTTAAGGAGGCCGGGCTTTTGGATGAATCGGCTCTTGAGAAGAAAGATCACGAGGCTTTGCTTGACAAGGTTTCGCGCCTTGAAACTGAGCTTTTCGACTACCAATACAACATGGGGTTGCTGCTTATTGAGAAGAATAATCTCGCTGCCAAGACTGAAGAAATGGGGCAGCAAGTATCTGAGGTTCAAGAGATCCTTAAGCGGGAGCAAGCTGCTCATCTGATTGCTATCTCAGAAGCTGGAAAGCGTGAGGATAATTTGAAGAGGGCATTGGATGTTGAGAAGAAGTGTGTGATTGACCTTGAGAGAGCATTACGTGATATGCGTGAAGAACATACAAAAATTAAGGATTCATCTGAAGGATCTGTGGCTGATGTTAATGCTCGTATTGAAATGTTGGAGCAAAGAAGCCTGGAGTTGGAAGGCAAGTCTCATTCAGTGAATGCAAGACTTGCTGAGGCAGACAGAAAGACATCCGAGTTAGACAGACAACTGCAAGATTTGGAAACTCGTGAAAGCATTCTGAAGAGGGAGCGTCTAACATTAACCCAAGAACGAGAAGCCCATGAGTCATATTTCCGGAGACAGAAGGAAGATTTGCTCGAGTGGGAGAGAAAACTGCAAGAAGCAGAGCAGAGGCTTTGTGACAGTCGGAGAACCCTTAATGAGCGGGAAGAGAAACTACATGAAACTGATAGGACTTGCAAGCAAAAGGAGATTAAGCTTCAAGAGCTGCAACAGAAGATTGATTTGGCTAATGCCACTTTGAAAAAGATGGAAAGCGAGATAAACAATCAATCAGCGGAATTGGAGTTGAAAGAGAAGAAAGCTGAAGCTCTGAGATGTGACCTAGAGATGAGGGAGAATCAGCTGAAGGAGAAAGAAGAAGGGCTCAATGCAAGAGAAACCGTGGAGTTGCAGAAGCTTCTTAATGAGCACAAGTCTAAACTTGATGTCAAAATGCATGAATTTGAGTTGGAGATGAAGCAAAAAAGAAAATCTGTTGAGGAGGAATTGAAAAGCTATAGAGAAGATGTGTGTCAGAAGGAAAGTGAAATTAATCATCTTGAGATGAAACTTGGCAAACGGGAACAAGCACTGGAGAAAAAGGCTGAGAGGGTCAAAGAGAAAGAGAAGGACGTTGAAGCAAAGGCGAAAACCTTGAAGGAGCAAGAAAAATGTCTCAAAGCGGAAGAGAAAAAACTGGAGGCAGAGAAGAAACAACTGAACACTGAGAAAGAGCGCCTGGAGAATTTAAAAGATGAGATTGAAGGATTGAGGACTGAAATGAGGAAACAGCAACTGCAAATTGAAGAAGAGAGAACAAAGCTTACAAATGCAGAAGAAGAGAGGTTAGAGTATCTTCGTCTGCAGTCATGTTTAAAGCAGGAGACGGAGAATGTTAGGCGTCAGAGCGAGGTAGTTGTGAAGGAAGCTGAGGATCTGAGGCTGGAACGAGAGAAGTTTGAGAAAGATTGGGAGGCATTGGATGACAAACGAGCTGGCGTGGATAATGAGCTTAAGACGCTTGCTGAAGAGAAAACAAGATTTGAGAAGTTACGGAACTCAGAGGAAGAGAGTTTGAAAAAGAAGTATATGGAGGCCGAACAGTATATTCAGCAGGAGAGGGAGAGCCTCAGACTAGAAAAAGAATCGTTTGAAGCCACCATGAAGCATGAGAAGCTAATGTTATCTAAAAAGGCTGAAAATGAGCACAGCCTAATGCATCAAGATTATGAACAGCGGAGACAGAAACTTCATCATGATATGCAGAAGAGACAGAATGAATGGGAGAAGATGGTAGAGGAAAAGGAGAGAGCGTTTGAAGAAATGAGGTTGAGAGAAATGAGAAACATCAATCACTTGAAGGAAAATGCTGAGAAAAAGAAGGAAGAAATGGAAACTGAAAGGCGACGGATGGAAAAAGAAATGCGGGAACTAGAAGTCAACAAGCAGCAACTTGAAGAGACCAGTATTGATATATCCAAAGATATTGAGGCTCTTGATAAACTTAGTAAAAAGCTGAAGAACCAGCGGGAAGAGTTGATCGCTGAAAGAGCCAATTTTGGTGCTCTCATTGAGAAGATTAAGAGGTGCAATAATTGTGGAGATTTTGCGCAGACATTTCTCCTTCACGATCTCCAGCTACCCACTGTGGATGGCTCTAATCATTTGCCTGGACATTCTCATGATGATCAGAAGGATGCCAAACATGATCAGAAGGTATCTTCAGTGGGACTTAGTGGAGGTTCTTCTGAGTTTGGAGGGAAGAGAAGCATTTTTCGAAGATGTGCATCAATCATCTTTCGTTCACCCCCAAATAAAGGGATTCAAGATGCTGATGATCATATTGTGCAAGAATCTCCGAAGTCTGCTGTGCATGTTCGTGCTGATGAAGTAATTGCAGGGGCACCTACTCCTGGTCATGATGAGCCAGGACCATCATTTGTAGTAAACGACTCTTTGAAGAATTTGCAGCGAGATGTTAGTGTTAAAGGAGATAATGTTGACCATGCTCCTTCTGTTGATGACTCCAATATTGGCAGCGAAATTCAAGACATTCAGGAGCCTGAGATGTCTGATGTGAAGAGTGGCAGGCGGAAACCTGGACGAAAACGTGGGTCTGGAGTTCGGAGGACGCGTTCTGTTAAAGCAGTGGTTGAGGAAGCCAAGGCTTTTCTTGGGGAGAGCTCCGAGGGAAAGATGGCGGAACAACTAAATGGTTCAGCAGGTGCCAATGCAAGGAACCTAGAAATAGTGCACGCTGACATGGCTCTTGCCTCTGGTGCCCGTAAGCGGAGTCATTCACAGGCCTCTAGAATGACAGAAAGTGAACAGGATATTGATTATAGTGATGGAAGGGCTGATAGTGTCACAACTGGTGGTCGCAGGAAAAGGAGACAGACTGTTTCCTCTGCCTTAACGACTCCTCGTCAGAGGCGTTACAATCTTAGGCATCATACAACTGCAGCAACAGCCAGTGCAGGACAAGAGGCAAGTCTCAAGACCAAGAAAGAAGGTGGAGCTTCTGATGAAGATGGTGCTAATCAACCTGCGCCAAACCCTGAAACAGCACCCTCCCAATCATTGGATGTCACTGCCGAAAGTGACAGAAGATACCATTTGGTACAAGTTTCCACCACTAGAAGTGTCGAGTTTTCGTCTGATAAGATTGTCAGGTTTGATACAGCAGTCAAGGTAGTTGACAGCAATGTTGATGCTACAAAATCAGCAGAGAACACTTTGTTGAGCGGAGAAGTAAAATCAGCTGAAAATATGGCGTTAAGTGAAGAGGTCAATGGGACTTCAGAAAATGTCGAGGAAGATGATAATGACAGCATATTTCATGAAAATGAGGACGACAATGATCGCGAAGATGAGGCAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23273.p1 GENE.S_Transcript_23273~~S_Transcript_23273.p1 ORF type:3prime_partial len:1199 (+),score=401.24 S_Transcript_23273:278-3871(+)
MFTPQRKAPWTPATSTPRTDSRITPLAASKGKAVAYIDGPPAPPPPLGYLGSDSLGQALTGRNSDDWKKFKEAGLLDESALEKKDHEALLDKVSRLETELFDYQYNMGLLLIEKNNLAAKTEEMGQQVSEVQEILKREQAAHLIAISEAGKREDNLKRALDVEKKCVIDLERALRDMREEHTKIKDSSEGSVADVNARIEMLEQRSLELEGKSHSVNARLAEADRKTSELDRQLQDLETRESILKRERLTLTQEREAHESYFRRQKEDLLEWERKLQEAEQRLCDSRRTLNEREEKLHETDRTCKQKEIKLQELQQKIDLANATLKKMESEINNQSAELELKEKKAEALRCDLEMRENQLKEKEEGLNARETVELQKLLNEHKSKLDVKMHEFELEMKQKRKSVEEELKSYREDVCQKESEINHLEMKLGKREQALEKKAERVKEKEKDVEAKAKTLKEQEKCLKAEEKKLEAEKKQLNTEKERLENLKDEIEGLRTEMRKQQLQIEEERTKLTNAEEERLEYLRLQSCLKQETENVRRQSEVVVKEAEDLRLEREKFEKDWEALDDKRAGVDNELKTLAEEKTRFEKLRNSEEESLKKKYMEAEQYIQQERESLRLEKESFEATMKHEKLMLSKKAENEHSLMHQDYEQRRQKLHHDMQKRQNEWEKMVEEKERAFEEMRLREMRNINHLKENAEKKKEEMETERRRMEKEMRELEVNKQQLEETSIDISKDIEALDKLSKKLKNQREELIAERANFGALIEKIKRCNNCGDFAQTFLLHDLQLPTVDGSNHLPGHSHDDQKDAKHDQKVSSVGLSGGSSEFGGKRSIFRRCASIIFRSPPNKGIQDADDHIVQESPKSAVHVRADEVIAGAPTPGHDEPGPSFVVNDSLKNLQRDVSVKGDNVDHAPSVDDSNIGSEIQDIQEPEMSDVKSGRRKPGRKRGSGVRRTRSVKAVVEEAKAFLGESSEGKMAEQLNGSAGANARNLEIVHADMALASGARKRSHSQASRMTESEQDIDYSDGRADSVTTGGRRKRRQTVSSALTTPRQRRYNLRHHTTAATASAGQEASLKTKKEGGASDEDGANQPAPNPETAPSQSLDVTAESDRRYHLVQVSTTRSVEFSSDKIVRFDTAVKVVDSNVDATKSAENTLLSGEVKSAENMALSEEVNGTSENVEEDDNDSIFHENEDDNDREDEAG

Click here to download the sequence:
Link to NCBI Protein BLAST