Transcript Information: S_Transcript_232891.p1


Annotated TAIR IDAT5G43820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17618948-17620588 | Forward length=546
E-Value2E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48682319332647
Replicate 20.13452920461899
Replicate 30.11245570782683
Condition 2: 8 Hour
Replicate 10.1300328677874
Replicate 20.27282742243569
Replicate 30
Condition 3: 24 Hour
Replicate 10.39960152726697
Replicate 20
Replicate 30.15379295368973


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232891.p1 GENE.S_Transcript_232891~~S_Transcript_232891.p1 ORF type:internal len:164 (+),score=29.25,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|0.0026,PPR|PF01535.16|5.9,PPR|PF01535.16|0.098,PPR|PF01535.16|0.0045 S_Transcript_232891:2-490(+)
TTTCTCCAAAAACTCAGGGGCAAACCTCTAATAGAGAATGCCTTATCTACTGCTTTGGATGATGATGAGCTCTGTATTGATGTAGTTTCTAGGGTTTTAGATAGAGGAAACCTAGGAGGTGGAGATATGAATTTGTTTTTTGATTGGGCAATTAAGCAACCTGGTATAAGTAGAGACCTAGGTGTGTATCATGTCATTCTTAAGGCCCTAGGTAGGAGGAAATTTCTAGATTTTATGGTGGGTAAGTTTAAGGAAATGGGTTTTGAGGGAATTAACCCTACTTGTGAGACACTTGTCATTGTAATGGATAGTTTTATTAGGGCCCGGTATGTGTCTCGAGCAGTTGAGATGTTTGGGAAACTTGAAGAGCTGGGGATGAAGTGTGATAGCGATGCCTTCAATGTGCTCTTAAGGTGTTTGTGTAAGAGGTCTCATGTTGGCATGGCGAATTCACTTCTAAATTCGATGAAGGGAAAAGTGGCTTTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232891.p1 GENE.S_Transcript_232891~~S_Transcript_232891.p1 ORF type:internal len:164 (+),score=29.25,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|0.0026,PPR|PF01535.16|5.9,PPR|PF01535.16|0.098,PPR|PF01535.16|0.0045 S_Transcript_232891:2-490(+)
FLQKLRGKPLIENALSTALDDDELCIDVVSRVLDRGNLGGGDMNLFFDWAIKQPGISRDLGVYHVILKALGRRKFLDFMVGKFKEMGFEGINPTCETLVIVMDSFIRARYVSRAVEMFGKLEELGMKCDSDAFNVLLRCLCKRSHVGMANSLLNSMKGKVAFD

Click here to download the sequence:
Link to NCBI Protein BLAST