Transcript Information: S_Transcript_232943.p1


Annotated TAIR IDAT5G60920.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COB
Annotation TypeOrtholog
Chromosome Positionchr5:24511466-24513932 | Reverse length=456
E-Value7.7E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98352395869145
Replicate 20.81536396190816
Replicate 30.9622297087096
Condition 2: 8 Hour
Replicate 10.97355042752129
Replicate 21.3131302462448
Replicate 30.78775958540149
Condition 3: 24 Hour
Replicate 10.56986652584159
Replicate 21.1331905788174
Replicate 30.32898318789282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_232943.p1 GENE.S_Transcript_232943~~S_Transcript_232943.p1 ORF type:complete len:460 (+),score=42.77,COBRA|PF04833.11|6.1e-74,COBRA|PF04833.11|8.5e+03 S_Transcript_232943:551-1930(+)
ATGGGTATCACCTTCATTCCCATGATCAGATTGGCCTCCAATTTGAGCATTTTCAGTGTTGTTTATCTCTTCTTTCTGTTTTGTTCTAGCTTCACTCTTACAGAGGCCTATGATCCTCTCGATCCAAATGGGAACATCACCATTAAGTGGGATATCATGACCTGGACTCCTGATGGTTATGTTGCTGTAGTTACCGTTAACAACTACCAAAAATACCGTCACATTCAAGCGCCAGGATGGCAACTGGGATGGACATGGACCAAAAAGGAGATTATATGGAGCATGGTGGGAGGGCAAGCAACTGAACAAGGGGATTGTTCAAAGTTTAAAGGAAATATTCCGCATTGCTGTAAGAGGGACCCAACCATTGTAGACTTGATGCCGGGAACCCCTTACAACCAGCAGATTGCTAACTGTTGTAGGGGAGGAGTGCTCAGTTCCTGGGTTCAGGATCCTTCCACTTCAATTAGTGCTTTTCAGATTAGTGTTGGTCAAGCAGGCACCACCAATAGAACTGTCAAAGTGCCGAAGAACTTCACCCTTAAGGCACCTGGACCTGGTTACACTTGTGGACCTGGAAAGATTGTTAAGCCCAGTCAATTTAAGACAAAAGATGGGAGGCGAACAACCCAAGCTCTGATGACTTGGAATGTGACATGCACCTATTCTCAGTTCCTGTCTCAGAAAACTCCAACATGTTGTGTCTCACTTTCATCCTTCTACAATGATACTATTGTACCCTGCCCAACATGCAGCTGTGGCTGCCAAAATAACATTACTCAGCCAGGAAGCTGTGTGGAGGCAAACTCGCCGTATCTGGCTTCAGTCGTTTCTGTTTCACATACTAACAAAAACAGTTACTTGTCACCTCTGGTCCAGTGCACCAGACATATGTGCCCAATCCGTGTTCACTGGCATGTAAAACTCAATTACAAGGACTATTGGCGTGTGAAGGTTACCATTACTAACTTCAACTACAGGATGAACTACTCGGAGTGGAATTTGGTTGTACAACATCCTAACTTTGACAACTTGACTCAGATATTCAGCTTCAATTATGAACCAATAACTCCATACTCTAATATAAATGATACTGCCATGATGTGGGGAATCAAGTTTTACAATGATCTACTTATGCAAGCCGGTCCGCAGGGCAATGTACAGTCGGAGTTACTCTTCCAGAAGGACAAGTCTACTTTCACATTTGATAAGGGCTGGGCTTTTCCGCTCAGGATCTACTTCAATGGGGATAACTGTGTCATGCCCCCTCCAGATTCCTACCCATGGTTGCCAAACGCAAGTTCTCGGCATGGTCAATCCCTGCTAACTATAACAGTGACACTGTTGTCAGCATTGACATTCTTATTTGTTCATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_232943.p1 GENE.S_Transcript_232943~~S_Transcript_232943.p1 ORF type:complete len:460 (+),score=42.77,COBRA|PF04833.11|6.1e-74,COBRA|PF04833.11|8.5e+03 S_Transcript_232943:551-1930(+)
MGITFIPMIRLASNLSIFSVVYLFFLFCSSFTLTEAYDPLDPNGNITIKWDIMTWTPDGYVAVVTVNNYQKYRHIQAPGWQLGWTWTKKEIIWSMVGGQATEQGDCSKFKGNIPHCCKRDPTIVDLMPGTPYNQQIANCCRGGVLSSWVQDPSTSISAFQISVGQAGTTNRTVKVPKNFTLKAPGPGYTCGPGKIVKPSQFKTKDGRRTTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNDTIVPCPTCSCGCQNNITQPGSCVEANSPYLASVVSVSHTNKNSYLSPLVQCTRHMCPIRVHWHVKLNYKDYWRVKVTITNFNYRMNYSEWNLVVQHPNFDNLTQIFSFNYEPITPYSNINDTAMMWGIKFYNDLLMQAGPQGNVQSELLFQKDKSTFTFDKGWAFPLRIYFNGDNCVMPPPDSYPWLPNASSRHGQSLLTITVTLLSALTFLFVHA*

Click here to download the sequence:
Link to NCBI Protein BLAST