Transcript Information: S_Transcript_233074.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5888358946376
Replicate 20.52687258644811
Replicate 30.55052943533136
Condition 2: 8 Hour
Replicate 11.9097364463104
Replicate 21.2020694791495
Replicate 31.3998467083868
Condition 3: 24 Hour
Replicate 10.78250328921531
Replicate 21.2177570399231
Replicate 30.67760716312252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_233074.p1 GENE.S_Transcript_233074~~S_Transcript_233074.p1 ORF type:complete len:335 (+),score=49.67,RVT_1|PF00078.23|6.5e-25 S_Transcript_233074:2895-3899(+)
ATGATGAAAATAGATTTGCAAAAGGCTTATGACAGCCTAGAATGGGGCTTCCTGAAGCAGGTAATGATTGAACTAGGATTTCCACCTCTCTATTTGGACTGGATCATGTGCTGTGTAGCCATAGTTAGTTATGTCCTTAATGTGAATGGTGAGTTACAAAAGCCTTTTGAAGCAAGAAGAGGATTGCGCCAAGGTGACCCTCTCTCTCCTGCACTCTTTGTTATTGCAATGGAATACCTCACAAGATGTATGGCTGGGTTACATAGGCAGAAGGAGTTTAGTTATCATCCCAAGTGCAAGAAGATCAAACTCACTCACTTATGTTTTGCGGATGATTTAATGCTTTTCACAAAAGGTGATGTGAATTCTGTAATGCTTGCTCATAAAGCCTTTGTTGAGTTCTCTAAGGCATCAGGCTTGAGTGCAAATATGGGGAATAGCTCAGTTTACTTTGGAGGAGTACCTGAAGACATACAGTTCAACATTTTAAACATCTTAGGATACTCAACTGGTACACTACCAGTAAAGTATCTTGGTATCCCTCTATCTAGCAAGAAGATCACAACTTCTCAATGTAGGCCTATTTTAGACAAAGTGATGGGAAGAATACACTCCTGGGCAGCTCGTTTGCTCTCTTACGCTGGAAGATTACAATTGATCAAATCTGTAATCTTTGGAATACAAGCATATTGGGCTCAGGTGATGCTTTTACCAAAGCAAGTTATTAAAAGCATTGAGAGTGAATGCTTGAGGTTTCTATGGGCTGGTAGTGAAGGTAAGAAGCCTGCTAAAGTGTCTTGGAGCAATATTTGTACCCCCAAAACTGCTGGTGGATTAAATGTGATGAACTTGCGGTTGTGGAACAAAGCAGCCATTTTTAAGCCGCTTTGGGCAATTCAACAAGGAAAAGAGGCCATGTGGATACAGTGGATATATACTTACTTCATCAGTGGGAGATCTATTCACAATATCAAGATTTCAACCAATCTATCCTGGATGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_233074.p1 GENE.S_Transcript_233074~~S_Transcript_233074.p1 ORF type:complete len:335 (+),score=49.67,RVT_1|PF00078.23|6.5e-25 S_Transcript_233074:2895-3899(+)
MMKIDLQKAYDSLEWGFLKQVMIELGFPPLYLDWIMCCVAIVSYVLNVNGELQKPFEARRGLRQGDPLSPALFVIAMEYLTRCMAGLHRQKEFSYHPKCKKIKLTHLCFADDLMLFTKGDVNSVMLAHKAFVEFSKASGLSANMGNSSVYFGGVPEDIQFNILNILGYSTGTLPVKYLGIPLSSKKITTSQCRPILDKVMGRIHSWAARLLSYAGRLQLIKSVIFGIQAYWAQVMLLPKQVIKSIESECLRFLWAGSEGKKPAKVSWSNICTPKTAGGLNVMNLRLWNKAAIFKPLWAIQQGKEAMWIQWIYTYFISGRSIHNIKISTNLSWMI*

Click here to download the sequence:
Link to NCBI Protein BLAST