Transcript Information: S_Transcript_233092.p1


Annotated TAIR IDAT3G28480.2
Annotated Gene NameOxoglutarate/iron-dependent oxygenase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10676266-10678262 | Reverse length=324
E-Value8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9220500892075
Replicate 20.98056842477844
Replicate 30.30737893472668
Condition 2: 8 Hour
Replicate 10.11847439065074
Replicate 20.74572828799089
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 10.3640813915099
Replicate 20.12591006431304
Replicate 30.84073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_233092.p1 GENE.S_Transcript_233092~~S_Transcript_233092.p1 ORF type:5prime_partial len:180 (+),score=34.94,ShK|PF01549.20|1e+04,ShK|PF01549.20|2e-11 S_Transcript_233092:3-542(+)
AACATTGAAGTTTTCCCATCAAACCCACCTCTCTCTCCATCTCTCATTTCTTCTTGTTCTTCACTTGCAAATCCAGCTCATCGTCGATTATCAATGGTTGAGTTTCAAGTTTTGCTTACACTTTCCGTCTTTCTTCTTCTATTTTTCCCTTATACTTCTCATGGGGGCCGGCTCAACAATCTGCACAGGAGTGGATCAGGGCTGCTATTAAAGAGTGAAGATGCTGTTGATTCAAGGGATGTTTCTCAACAAGGATCAGTGAAACCGAACAAGAGAGATGCTTTGCCATTCTTCAATTTGCATCGTGATGCAACAACTGATCCAATGAGCCCCCTTGTTATTAAGGTTGAGAGACGGTTTGCAAGTGAGTCGATTCGTGTTCGGTCTATTGACAAATCCTTGCAACAAGATACAGTTTCTATAGGTTGTATGGATGATAAGTTGTACTGTGCTCAGTGGGTGCGTTCAGGTTTCTGTACTAGTCAGTTTTACACTCACATCATGAAGGAAATTTGTAGAAAGAGTTGCGGCTTTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_233092.p1 GENE.S_Transcript_233092~~S_Transcript_233092.p1 ORF type:5prime_partial len:180 (+),score=34.94,ShK|PF01549.20|1e+04,ShK|PF01549.20|2e-11 S_Transcript_233092:3-542(+)
NIEVFPSNPPLSPSLISSCSSLANPAHRRLSMVEFQVLLTLSVFLLLFFPYTSHGGRLNNLHRSGSGLLLKSEDAVDSRDVSQQGSVKPNKRDALPFFNLHRDATTDPMSPLVIKVERRFASESIRVRSIDKSLQQDTVSIGCMDDKLYCAQWVRSGFCTSQFYTHIMKEICRKSCGFC*

Click here to download the sequence:
Link to NCBI Protein BLAST