Transcript Information: S_Transcript_233353.p1


Annotated TAIR IDAT5G41770.1
Annotated Gene Namecrooked neck protein, putative / cell cycle protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16718021-16720936 | Forward length=705
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.558197491893
Replicate 214.974599569428
Replicate 316.227472559811
Condition 2: 8 Hour
Replicate 120.090924886329
Replicate 219.425628341297
Replicate 315.269673754654
Condition 3: 24 Hour
Replicate 117.102868261088
Replicate 213.840996360664
Replicate 316.242850593743


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_233353.p1 GENE.S_Transcript_233353~~S_Transcript_233353.p1 ORF type:complete len:691 (-),score=174.59,HAT|PF02184.12|68,HAT|PF02184.12|0.0077,HAT|PF02184.12|45,HAT|PF02184.12|0.039,HAT|PF02184.12|3.7e-13,HAT|PF02184.12|3.9,HAT|PF02184.12|3.5e+03,HAT|PF02184.12|8,HAT|PF02184.12|1e+03,HAT|PF02184.12|4.3e+03,HAT|PF02184.12|41,HAT|PF02184.12|2.9e+02,HAT|PF02184.12|4e+02,HAT|PF02184.12|70,HAT|PF02184.12|11,HAT|PF02184.12|0.11,HAT|PF02184.12|3.7e+03,Suf|PF05843.10|34,Suf|PF05843.10|4.8e-05,Suf|PF05843.10|0.0038,Suf|PF05843.10|18,Suf|PF05843.10|0.34,Suf|PF05843.10|35,TPR_14|PF13428.2|0.05,TPR_14|PF13428.2|2,TPR_14|PF13428.2|22,TPR_14|PF13428.2|0.014,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|18,TPR_14|PF13428.2|27,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|3.8e+03,TPR_19|PF14559.2|54,TPR_19|PF14559.2|20,TPR_19|PF14559.2|33,TPR_19|PF14559.2|5.3,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|1.1e+02,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|56,TPR_16|PF13432.2|0.55,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|74,TPR_16|PF13432.2|2e+02,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|7.1e+03,TPR_16|PF13432.2|4.3e+03,TPR_2|PF07719.13|1.5,TPR_2|PF07719.13|1.3e+03,TPR_2|PF07719.13|1e+03,TPR_2|PF07719.13|0.38,TPR_2|PF07719.13|5.5e+03,TPR_2|PF07719.13|7e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|4.5e+03,TPR_2|PF07719.13|1.9e+03 S_Transcript_233353:740-2812(-)
ATGGCTACAAAGAAAGAAGCAGCAAAACTCCCTCGGCCGACTAGAGTGAAGAACAAGACTCCTGCTCCCATTCAGATTACTGCTGAGCAGATTCTTCTTGAAGCTCGTGAACTCCAAGAATCTGATATCCACCCTCCCAAACAGAAGATTGCTGATTCTACTGAGTTAGGAGAGTACCGCCTCCGAAAACGCAAGAAGTTTGAGGATTTGATTCGTAGAGTTCGTCAGAAAACGAGTGTTTGGACAAAATATGCAAAACAGGAGGAGTCCCAGAATGATTTTAAGCGTGCTCGGTCTGTTTGGGAACGTGCGCTGGAGGTGGATTATAGGAACCATACCTTGTGGCTTAAGTATGCTGAGATGGAGATGAAGAACAAGTTTATAAACCATGCTCGTAATGTGTGGGATCGTGCAGTTTCATTTCTGCCTAGAGTTGATCAGCTGTGGTATAAATATATTCATATGGAAGAGATGCTTGGGAATGTGGCTGCTGCGAGGCAGGTTTTCGAGAGATGGATGCAGTGGCAGCCTGATCAGCAAGGGTGGCTCTCTTATATTAAGTTTGAGTTGCGATACAATGAGATTGATAGAACAAGGGCAATTTATGAGCGGTTTGTGCAGTGTCATCCAAAAGTTGGGGCATGGATTCGTTTCGCGAAGTTTGAGATGAAGAATGGGGAGATTGCTCGAGCTAGGAATTGTTATGAAAGAGCTGTTGACAAGTTGGCAGATGATGAAGAGGCTGAGCTGTTGTTTGTGGCGTTTGCTGAGTTTGAGGAAAAATGCAAGGAGACAGAGCGTGCAAGATGTATCTATAAATTTGCCTTGGACCATATACCTAAAGGGCGAGCCGAAGAGGTTTACAAGAAGTATGTTGCATTTGAGAAGCAGTATGGAGACAGGGAGGGCATTGATGATGCAATTGTAGGGAAAAGGAGATTTCAATATGAAGACGAGGTCCGAAAGAACCCTCTTAACTATGACACATGGTTTGATTACATTCGGTTAGAGGAGAGTGTAGGTATCAAAGAGCGAGTAAGAGAAGTATATGAACGTGCAATAGCCAATATTCCTCCTGCTGAGGAGAAGCGCTACTGGCAGCGTTACATTTACTTGTGGATTAATTATGCTTTATATGAAGAACTTGATGCACAAGACATGGAGCGAACAAGAGAAGTATACAGGGAATGTCTGAAGTTGATACCACATGACAAGTTTTCCTTTGCAAAAATCTGGCTTTTGGCAGCGCAGTTTGAGATACGACAGTTGAATCTCCAAGGGGCACGGCAGATATTAGGCAATGCAATTGGGAGGGCCCCAAAAGATAAGATCTTCAAGAAGTACATTGAAATAGAGTTGCAGTTAGGAAACATAGGTCGCTGTCGAAAACTCTATGAGAAGTATCTAGAGTGGTCACCGGAGAACTGCTATGCATGGACCAAGTACACGGAGTTGGAGAGATCTCTGTGTGAAACAGAACGGGCTAGGGCTATTTATGAGCTTGCCATTGCCCAGCCTGCTTTAGATATGCCAGAATTATTGTGGAAGGCTTACATTGATTTTGAGATAGGAGAGGGTGAATTTGAATATACAAGGGCATTATATGAGAGGCTTCTTGACAGGACAAAGCACTTAAAGGTATGGATCAGCTATGCAAAATTTGAAGCTTTTGCTATTGAGGACCATGGGGGCTCTGACATGCCAGAGGATGAGATTCAAGAACTTTATGAAAAGAAGAAATTGTGTGTTCAGTGTGCCAGACGGGTATTTGAAAGGGCCCTTACTCACTTCAGGGTTTCTGCTCCTGAGCTGAAAGAGGAGAGGGCGATGCTCTTAGAAGAGTGGCTGAACTTAGAGAAAGACTTCGGGGTGCTTGGAGATGTTGATTCAGTGCAGGCCAAGATGCCACGTAAACTAAAGAGGCGTCGGCCACTAATGACAGAAGATGGCCCAGCCGGGTTTGAGGAATACTTTGACTACATGTTCCCTGAGGAAACGCAGCAAAACAATCTTAAGATATTGGAGGCTGCATTGAAATGGAAGAAGCAAAAGCTTGATGGTGAGGACGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_233353.p1 GENE.S_Transcript_233353~~S_Transcript_233353.p1 ORF type:complete len:691 (-),score=174.59,HAT|PF02184.12|68,HAT|PF02184.12|0.0077,HAT|PF02184.12|45,HAT|PF02184.12|0.039,HAT|PF02184.12|3.7e-13,HAT|PF02184.12|3.9,HAT|PF02184.12|3.5e+03,HAT|PF02184.12|8,HAT|PF02184.12|1e+03,HAT|PF02184.12|4.3e+03,HAT|PF02184.12|41,HAT|PF02184.12|2.9e+02,HAT|PF02184.12|4e+02,HAT|PF02184.12|70,HAT|PF02184.12|11,HAT|PF02184.12|0.11,HAT|PF02184.12|3.7e+03,Suf|PF05843.10|34,Suf|PF05843.10|4.8e-05,Suf|PF05843.10|0.0038,Suf|PF05843.10|18,Suf|PF05843.10|0.34,Suf|PF05843.10|35,TPR_14|PF13428.2|0.05,TPR_14|PF13428.2|2,TPR_14|PF13428.2|22,TPR_14|PF13428.2|0.014,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|18,TPR_14|PF13428.2|27,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|3.8e+03,TPR_19|PF14559.2|54,TPR_19|PF14559.2|20,TPR_19|PF14559.2|33,TPR_19|PF14559.2|5.3,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|1.1e+02,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|56,TPR_16|PF13432.2|0.55,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|74,TPR_16|PF13432.2|2e+02,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|7.1e+03,TPR_16|PF13432.2|4.3e+03,TPR_2|PF07719.13|1.5,TPR_2|PF07719.13|1.3e+03,TPR_2|PF07719.13|1e+03,TPR_2|PF07719.13|0.38,TPR_2|PF07719.13|5.5e+03,TPR_2|PF07719.13|7e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|4.5e+03,TPR_2|PF07719.13|1.9e+03 S_Transcript_233353:740-2812(-)
MATKKEAAKLPRPTRVKNKTPAPIQITAEQILLEARELQESDIHPPKQKIADSTELGEYRLRKRKKFEDLIRRVRQKTSVWTKYAKQEESQNDFKRARSVWERALEVDYRNHTLWLKYAEMEMKNKFINHARNVWDRAVSFLPRVDQLWYKYIHMEEMLGNVAAARQVFERWMQWQPDQQGWLSYIKFELRYNEIDRTRAIYERFVQCHPKVGAWIRFAKFEMKNGEIARARNCYERAVDKLADDEEAELLFVAFAEFEEKCKETERARCIYKFALDHIPKGRAEEVYKKYVAFEKQYGDREGIDDAIVGKRRFQYEDEVRKNPLNYDTWFDYIRLEESVGIKERVREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVYRECLKLIPHDKFSFAKIWLLAAQFEIRQLNLQGARQILGNAIGRAPKDKIFKKYIEIELQLGNIGRCRKLYEKYLEWSPENCYAWTKYTELERSLCETERARAIYELAIAQPALDMPELLWKAYIDFEIGEGEFEYTRALYERLLDRTKHLKVWISYAKFEAFAIEDHGGSDMPEDEIQELYEKKKLCVQCARRVFERALTHFRVSAPELKEERAMLLEEWLNLEKDFGVLGDVDSVQAKMPRKLKRRRPLMTEDGPAGFEEYFDYMFPEETQQNNLKILEAALKWKKQKLDGEDD*

Click here to download the sequence:
Link to NCBI Protein BLAST