Transcript Information: S_Transcript_233401.p1


Annotated TAIR IDAT5G09380.1
Annotated Gene NameRNA polymerase III RPC4
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2911313-2913136 | Reverse length=272
E-Value7.6E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5388470101975
Replicate 21.0506090265483
Replicate 31.1291471071592
Condition 2: 8 Hour
Replicate 10.36267670607369
Replicate 21.1414208489656
Replicate 32.0300807242839
Condition 3: 24 Hour
Replicate 10.22290697439382
Replicate 20.5396145613416
Replicate 30.77210340015662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_233401.p1 GENE.S_Transcript_233401~~S_Transcript_233401.p1 ORF type:complete len:294 (+),score=69.21,RNA_pol_Rpc4|PF05132.10|5.5e+03,RNA_pol_Rpc4|PF05132.10|5.9e-25 S_Transcript_233401:84-965(+)
ATGGATCCACCATCAAATGATGACAAACCCAAAGTTCCGAAAAAGCTGGTATTTAAGCCAAAACCTCCAGTGAACAGACCACGGAAGCCTGTCGCACCCAAAAAGGAAGTGGTTGAGGACACTGAAGCTGCTGAGAAAATTGAGTTGCTTCGTCGTCTTCAGGATGGCTTAGCAGGAGGAAAGCCTAAGATTGAGAAAAAATCGGAGCCTGTGCGAGTTGCATTTGGGCATGGATCATCAATCTCCAATAATCAAAACAATGCTTCTAACAGCTTCTATCCTAGAGATGATAAACCTCGTGTTTCCTCACTGGAGGGGCAGAAAGAATACGTAGAGCCATGGAATTACTATGGAAATTATCCTACAACTCTTCCTCTTAGAAGACCGTATTCTGGAAATCCAGAAATTCTTGATGAGATAGAGTTTGGAGAGCACTCTACTACTTTTGATGAAACAAGTATTAACTCAGCCTCGGAGCTAGGCCTCATGGACGAGAATGAAGGGCCCAAAATGTTGTTTCTTCAGCTACCAAAAACTTTGCCTTCATTAAAACGGACGACTGCTGAAGCAGGTCAGGCATCTAACAACGGCTTGAAACCACCAAGTGGCACAATCCCTGTTGAGAAGCCATGTGGTGTTAATGAGTTAGAAGCGGGCTTCATGGGCAAAATGATGGTTTACAAAAGCGGTGCAGTAAAGCTTAAGCTTGGGGATACCATTTATGATGTAACCCCTGGTTCAGACTGTGTATTCGCCCAGGATGTCGTGGCTATCAATACTGACAAGAAGCATTGTTGTACCTTGGGGGAGCTCAACAAGCGTGCTATAGTAACTCCAGATGTGGACTCCATTTTGGACAATTTTGCCGACTTAGATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_233401.p1 GENE.S_Transcript_233401~~S_Transcript_233401.p1 ORF type:complete len:294 (+),score=69.21,RNA_pol_Rpc4|PF05132.10|5.5e+03,RNA_pol_Rpc4|PF05132.10|5.9e-25 S_Transcript_233401:84-965(+)
MDPPSNDDKPKVPKKLVFKPKPPVNRPRKPVAPKKEVVEDTEAAEKIELLRRLQDGLAGGKPKIEKKSEPVRVAFGHGSSISNNQNNASNSFYPRDDKPRVSSLEGQKEYVEPWNYYGNYPTTLPLRRPYSGNPEILDEIEFGEHSTTFDETSINSASELGLMDENEGPKMLFLQLPKTLPSLKRTTAEAGQASNNGLKPPSGTIPVEKPCGVNELEAGFMGKMMVYKSGAVKLKLGDTIYDVTPGSDCVFAQDVVAINTDKKHCCTLGELNKRAIVTPDVDSILDNFADLDI*

Click here to download the sequence:
Link to NCBI Protein BLAST