Transcript Information: S_Transcript_23351.p1


Annotated TAIR IDAT1G52380.1
Annotated Gene NameNUP50 (Nucleoporin 50 kDa) protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19509979-19511301 | Forward length=440
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.282923647006
Replicate 211.408536480595
Replicate 39.0637378188635
Condition 2: 8 Hour
Replicate 19.022280518787
Replicate 211.281530510631
Replicate 310.020270241658
Condition 3: 24 Hour
Replicate 18.9620034833207
Replicate 211.62246747505
Replicate 310.455291911522


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23351.p1 GENE.S_Transcript_23351~~S_Transcript_23351.p1 ORF type:3prime_partial len:234 (-),score=100.80,NUP50|PF08911.7|3.1e-17,NUP50|PF08911.7|1.4e+04,NUP50|PF08911.7|1.3e+04 S_Transcript_23351:2-649(-)
ATGGCGGATGAAAATCAGCCTTCAAAGAAAAGAGCTGCTGGTAGAGAGTTATCTCGAGACAACCCTGGACTTGATGATGAAGAAGATGTTCCACAGATGGGAACTTTCAAGAAGGCAAGCGATGAAGTGCTGGCTGGTCGAAGAATAGTGAAAGTCCGTCGTCAGCAAACATCTTCAACGCCCTCTACTCCCTCATCAAATCCATTTGCAGGGATCAGTTTGGTCCCTTCTAACCCCACTGCTATCCCTGCCAATGCTAATACTGAAGGGCAGGCTGCCGAAGACAAAATAGCTGGTGAAGATCCAGATACGAAAGATGAAACAAACTCAGAGGCTGAGGTGGAAAGTAAAGAGCCAGAGGAGAAACATGGAGAGGCTGCAGTAGAATCTAATGAAGACAAGGAAAAAGTAGTGCCTGCTGACCAAGCTGCTGATGCTGCTAATACTGCTGAAAAGGAATCAATTGATGAATGTGCTCAAGATGATAAAGCAGATGCTGGTGATACTGCTAAAAAGGACACTGAGACCGAGTCAACTGATAAGAAAGAAGGTGATGGCAGTGCTGAGAAAACAGCTGAAGCTGAGCCTGCTGGTGACAAAGAAGCTGAAGGCGACAAGATTGAGAACAATGACAAGGAACAGGATGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23351.p1 GENE.S_Transcript_23351~~S_Transcript_23351.p1 ORF type:3prime_partial len:234 (-),score=100.80,NUP50|PF08911.7|3.1e-17,NUP50|PF08911.7|1.4e+04,NUP50|PF08911.7|1.3e+04 S_Transcript_23351:2-649(-)
MADENQPSKKRAAGRELSRDNPGLDDEEDVPQMGTFKKASDEVLAGRRIVKVRRQQTSSTPSTPSSNPFAGISLVPSNPTAIPANANTEGQAAEDKIAGEDPDTKDETNSEAEVESKEPEEKHGEAAVESNEDKEKVVPADQAADAANTAEKESIDECAQDDKADAGDTAKKDTETESTDKKEGDGSAEKTAEAEPAGDKEAEGDKIENNDKEQDE

Click here to download the sequence:
Link to NCBI Protein BLAST