Transcript Information: S_Transcript_234328.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value9.5E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85454591122139
Replicate 21.5180818502877
Replicate 30.93059677486058
Condition 2: 8 Hour
Replicate 12.1521036099859
Replicate 20.82098527118263
Replicate 32.1511405839889
Condition 3: 24 Hour
Replicate 10.50102943785766
Replicate 20.51981219211806
Replicate 30.69418470839769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234328.p1 GENE.S_Transcript_234328~~S_Transcript_234328.p1 ORF type:5prime_partial len:218 (+),score=28.34,cNMP_binding|PF00027.25|4.6e-07 S_Transcript_234328:3-656(+)
GACCGTCTCAAACCAGTGCTTTACACAGATAACAGCTCCATTTTAAGAGAAGGAGATCCAGTAAATGAGATGCTGTTTATTATGAGAGGAAAACTATTGACTATGACTACAAATGGTGGAAGGACTGGCTTCTTTAACTCGGATTTTCTTAACGCTGGTGATTTCTGTGGTGAAGAGTTGCTTACTTGGGCTCTAGACCCACACACCTCCTCAAATCTGCCTATCTCAACTAGAACTGTACAGACCAAAAGTGATGTTGAGGCCTTTGCACTTGTCGCAGACGATCTCAAGTTTGTGGCGTCACAATTTCGCCGTCTTCACAGCAAGCAGCTCCGACACACATTCAGGTTCTATTCACAGCAATGGAGAACATGGGCAGCCTGTTTTATACAGGTAGCATGGCGAAGACACTGCAGACGGAAGCTTGAGAAATCTCTTCAAGAGGCTGAGGTTCGGTTAAAAAACGCTCTGGCTAAGGAGGGTGGAAGTTCCCCTAGCTTTGGTGCGGCTATTTATGCATCAAGGTTCGCTGCCAACGCACTAAGGAGCTTACGACGAAATAGTACTAGAAATGCCAGAATGTCTAAGAGGCTAATTTCTCCCCTCAACCTTCAAAAGCCAACTGAGCCTGATTTCAATTCTGACGACGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234328.p1 GENE.S_Transcript_234328~~S_Transcript_234328.p1 ORF type:5prime_partial len:218 (+),score=28.34,cNMP_binding|PF00027.25|4.6e-07 S_Transcript_234328:3-656(+)
DRLKPVLYTDNSSILREGDPVNEMLFIMRGKLLTMTTNGGRTGFFNSDFLNAGDFCGEELLTWALDPHTSSNLPISTRTVQTKSDVEAFALVADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQVAWRRHCRRKLEKSLQEAEVRLKNALAKEGGSSPSFGAAIYASRFAANALRSLRRNSTRNARMSKRLISPLNLQKPTEPDFNSDDG*

Click here to download the sequence:
Link to NCBI Protein BLAST