Transcript Information: S_Transcript_234465.p1


Annotated TAIR IDAT5G40670.1
Annotated Gene NamePQ-loop repeat family protein / transmembrane family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16285968-16287591 | Forward length=270
E-Value5.6E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60029326094392
Replicate 20.33177127154158
Replicate 30.1386671885985
Condition 2: 8 Hour
Replicate 10.16034128057995
Replicate 20.50462816480586
Replicate 30.16026953086452
Condition 3: 24 Hour
Replicate 10.49274173287055
Replicate 20.1704045983184
Replicate 30.37927886323483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234465.p1 GENE.S_Transcript_234465~~S_Transcript_234465.p1 ORF type:5prime_partial len:133 (+),score=11.67,PQ-loop|PF04193.10|7.1e+03,PQ-loop|PF04193.10|2e-16,PQ-loop|PF04193.10|9.7e+02 S_Transcript_234465:1-399(+)
GTCTCTGCTGTATGGTTGTCAGCTGCAATCTGTGTTTTTGTAGCTATTCACAGACATTCATGGCTCTGGTTGATCTCCGTTTTCAACACGATTCAGATCGTAATGACAGTGATCAAATACATTCCACAGGCATTTATGAACTTCCAAAGGAAAAGTACAGATGGGTTCAGCATAGGAAACATTCTGCTTGATTTGCTGGGAGGTTTAACAAATTATGGACAGATGGTTGTACAATCAATAGACCAGAAATCATGGATCAACTTCTATGGAAACATAGGGAAGGCACTTCTATCATTGGTGTCCATATTCTTCGACATGCTGTTCATCATTCAACATTATGTGCTCTATCCAGCGAAGAAAAAGACGCTGCCTACTACTACAAGTGCTGCTCAATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234465.p1 GENE.S_Transcript_234465~~S_Transcript_234465.p1 ORF type:5prime_partial len:133 (+),score=11.67,PQ-loop|PF04193.10|7.1e+03,PQ-loop|PF04193.10|2e-16,PQ-loop|PF04193.10|9.7e+02 S_Transcript_234465:1-399(+)
VSAVWLSAAICVFVAIHRHSWLWLISVFNTIQIVMTVIKYIPQAFMNFQRKSTDGFSIGNILLDLLGGLTNYGQMVVQSIDQKSWINFYGNIGKALLSLVSIFFDMLFIIQHYVLYPAKKKTLPTTTSAAQS*

Click here to download the sequence:
Link to NCBI Protein BLAST