Transcript Information: S_Transcript_23447.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value5.3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83165628859939
Replicate 20.68946217367234
Replicate 30.96055917102086
Condition 2: 8 Hour
Replicate 14.887068614343
Replicate 23.7286414399544
Replicate 31.998360712967
Condition 3: 24 Hour
Replicate 10.22755086969369
Replicate 20.70824411176086
Replicate 30.52545925843992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23447.p1 GENE.S_Transcript_23447~~S_Transcript_23447.p1 ORF type:5prime_partial len:96 (+),score=28.54,Hist_deacetyl|PF00850.15|9e-12 S_Transcript_23447:3-290(+)
AGGTACATTGATCAGAAGGTTGAAGTTGAGAGTGGAACATCAACAAATGAGTACTTGCAGAAGTTAGATGATGCACTTGAGTTTGCACGGCATATGTTTCATCCTGAGTTGGTGGTGTACAATGCTGGTACGGACATTCTGGATGGCGATCCACTTGGTAGGCTGAGGGTTAGCCCTGATGGTATAATTAAGAGAGATGAGAAGGTTTTTGCATTTGCTCGCGAGAAGAACATTCCTCTTCTGATGCTTACATCAGGTGTTGTTCAGTGCTTGACTTCAGTGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23447.p1 GENE.S_Transcript_23447~~S_Transcript_23447.p1 ORF type:5prime_partial len:96 (+),score=28.54,Hist_deacetyl|PF00850.15|9e-12 S_Transcript_23447:3-290(+)
RYIDQKVEVESGTSTNEYLQKLDDALEFARHMFHPELVVYNAGTDILDGDPLGRLRVSPDGIIKRDEKVFAFAREKNIPLLMLTSGVVQCLTSVI*

Click here to download the sequence:
Link to NCBI Protein BLAST