Transcript Information: S_Transcript_234470.p1


Annotated TAIR IDAT4G16580.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9341152-9342555 | Reverse length=467
E-Value2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37220980748504
Replicate 20.77142620830471
Replicate 30.4513956384098
Condition 2: 8 Hour
Replicate 10.44738581084894
Replicate 20.86045571691256
Replicate 30.67077842113578
Condition 3: 24 Hour
Replicate 10.53466498053902
Replicate 21.3471496391535
Replicate 30.17637793290291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234470.p1 GENE.S_Transcript_234470~~S_Transcript_234470.p1 ORF type:5prime_partial len:286 (+),score=45.13,SpoIIE|PF07228.8|1.4e-09,PP2C|PF00481.17|7.2e-05,PP2C|PF00481.17|0.11 S_Transcript_234470:3-860(+)
AAAATTGGATTATGTGCGGCGAATGCAATAGTAGGGCAGACTAAACGACGAAGGGTAGCTCATTACCAAGACTTTAATTGCACTAGGAAACTTACCATTGATCAAGCGAGTATGGTTGAGTTGCTATCAGGAGTGTTCTACGTACCTAAAGACAAAGAGTCGAGGCCTAAAGGAGACGATGCCCATTTCATCAGTGCAGAGAGGCAGACAATTGCTGTTGCTGATGGAGTTGGTGGTTGGTGGTCGAAGGGCATTGATCCCGGTGAATATGCTAGAGAGCTCATAGCTAACGCTTTTCTTTCGACTATGTGTGTCCCAGCAGGCTCATTTGTGGATCCTAAGAAGGTTTTGATTGCAGCTCACTCCAGAACTAAGGTTCAAGGGTCGTCTACTGCTTGCATTGTCACAGTTCATAACAATCAATTGCGCGCTGCAAATGTGGGAGATAGCAGATTTGTATTAGTTAGAGAAGGGAAACTCATCTACAAGTCACCCAAACAACAGCGCGACTTCAACATTCCATTTCAGCTTGGAAACGGCTCCAATTTTAACTGCCCAACCAAAGCACAGGAAATTAGGATGCCAGTAAGAGCTGGAGATGTGATAGTTCTTGGAACCGATGGGCTGTTTGATAACATATTTACCGAAGAGCTTGAAGAGCTTGTGAGATTGCGGGTAGATTCGCATCCAGAATATGCAGCTATGTGCATTGGAGGTTATGCCATGCAGAATTCACTGAACAGATCTCGTGAAACTCCATTCTCAGTGGCTGCAAACAGGGCAGGGAGAAGCCACATGGGAGGCAAGCACGATGATATCACTTGCATTGTGGCTTTTGTTCGTCCATCCGCGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234470.p1 GENE.S_Transcript_234470~~S_Transcript_234470.p1 ORF type:5prime_partial len:286 (+),score=45.13,SpoIIE|PF07228.8|1.4e-09,PP2C|PF00481.17|7.2e-05,PP2C|PF00481.17|0.11 S_Transcript_234470:3-860(+)
KIGLCAANAIVGQTKRRRVAHYQDFNCTRKLTIDQASMVELLSGVFYVPKDKESRPKGDDAHFISAERQTIAVADGVGGWWSKGIDPGEYARELIANAFLSTMCVPAGSFVDPKKVLIAAHSRTKVQGSSTACIVTVHNNQLRAANVGDSRFVLVREGKLIYKSPKQQRDFNIPFQLGNGSNFNCPTKAQEIRMPVRAGDVIVLGTDGLFDNIFTEELEELVRLRVDSHPEYAAMCIGGYAMQNSLNRSRETPFSVAANRAGRSHMGGKHDDITCIVAFVRPSAK*

Click here to download the sequence:
Link to NCBI Protein BLAST