Transcript Information: S_Transcript_234830.p1


Annotated TAIR IDAT5G05330.1
Annotated Gene NameHMG-box (high mobility group) DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1577289-1578750 | Reverse length=220
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59470393821632
Replicate 20.36976742275164
Replicate 30.20606409031956
Condition 2: 8 Hour
Replicate 10.11913625875493
Replicate 20.99985915708275
Replicate 31.4289953701664
Condition 3: 24 Hour
Replicate 10
Replicate 20.12661347249356
Replicate 30.56362110402494


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234830.p1 GENE.S_Transcript_234830~~S_Transcript_234830.p1 ORF type:complete len:179 (+),score=40.14 S_Transcript_234830:93-629(+)
ATGGCGAACCCCCCACGAAATCGCAAAAGGGTTCGCGCTCTTCGCCGTGCCCCTGATGGCAGCGCCTTCCAGAAGTGCGATGAATGTGGAGCTTCTGTGGCAGTAGCTTTGATGGACATGCATGACTGCCAATTGAAGAAGAATGTCAAGAAACTCAAACCCAAATGTGGGGGCCCAGTTGACAATAACAACACCATTTCTGAAGAGCCCAGATCAGCTTTTCAATATTTCTTGGAAGGCTATATGGAGACTTGCAAGGGTGGAGATGTGCTTGAAAATGATCGAAAAGCGTTTGAGAAATGGAAGACCATGTCACATGAGGAGCGTTGGCCGTATGTTTACAAAGCTCTTAAGGCCGAAAAGGCTTATGTGAAAGTATTGCATCAAGAGGTTGAAAAAATGTCTCAAGAAGACGATGATGAGGCAGATTCAGCAATGGTTGGCAAGTTTACTCAGGACTATGAAGACTCAGAGAACTCTGGCAATTTTTTTGCAGATAGTGACGGAAGATGTGCCTGCGAATTCTGTTGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234830.p1 GENE.S_Transcript_234830~~S_Transcript_234830.p1 ORF type:complete len:179 (+),score=40.14 S_Transcript_234830:93-629(+)
MANPPRNRKRVRALRRAPDGSAFQKCDECGASVAVALMDMHDCQLKKNVKKLKPKCGGPVDNNNTISEEPRSAFQYFLEGYMETCKGGDVLENDRKAFEKWKTMSHEERWPYVYKALKAEKAYVKVLHQEVEKMSQEDDDEADSAMVGKFTQDYEDSENSGNFFADSDGRCACEFCCA*

Click here to download the sequence:
Link to NCBI Protein BLAST