Transcript Information: S_Transcript_234832.p1


Annotated TAIR IDAT5G05330.1
Annotated Gene NameHMG-box (high mobility group) DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1577289-1578750 | Reverse length=220
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43867584453594
Replicate 20.36367235534365
Replicate 30.81066971796046
Condition 2: 8 Hour
Replicate 10.58586237134981
Replicate 20.98337796218578
Replicate 31.2883204596417
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.27716532313314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234832.p1 GENE.S_Transcript_234832~~S_Transcript_234832.p1 ORF type:complete len:182 (+),score=42.49 S_Transcript_234832:93-638(+)
ATGGCGAACCCCCCACGAAATCGCAAAAGGGTTCGCGCTCTTCGCCGTGCCCCTGATGGCAGCGCCTTCCAGAAGTGCGATGAATGTGGAGCTTCTGTGGCAGTAGCTTTGATGGACATGCATGACTGCCAATTGAAGAAGAATGTCAAGAAACTCAAACCCAAATGTGGGGGCCCAGTTGACAATAACAACACCATTTCTGAAGAGCCCAGATCAGCTTTTCAATACTTCTTGGAAAGCTATATGGAGACTTGCAAGAGTGGAGATGTGCTTGAGAATGATCGAAAAGCGTTTGAGAAGTGGAAGACTATGTCACATGAGGAGCGCTGGCCCTATGTCTACAAAGCTAATAAGGCCGAAAAGGCTTATATAAAAGTGTTGCATCAAGAGGTTGAAAAAATGTCTCAAGAAGACGATGATGAGGCAGATTCAGCAATGGTTGGCAAGTTTACTCAGGACTATGAAGACTCAGAGAACTCTGGCAGTTTTTTTGCAGACAGTGACAGCGGAGTGGATCTTCTATATGATTTGAATGTGTTTCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234832.p1 GENE.S_Transcript_234832~~S_Transcript_234832.p1 ORF type:complete len:182 (+),score=42.49 S_Transcript_234832:93-638(+)
MANPPRNRKRVRALRRAPDGSAFQKCDECGASVAVALMDMHDCQLKKNVKKLKPKCGGPVDNNNTISEEPRSAFQYFLESYMETCKSGDVLENDRKAFEKWKTMSHEERWPYVYKANKAEKAYIKVLHQEVEKMSQEDDDEADSAMVGKFTQDYEDSENSGSFFADSDSGVDLLYDLNVFP*

Click here to download the sequence:
Link to NCBI Protein BLAST