Transcript Information: S_Transcript_234845.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.114667074148
Replicate 248.253455870952
Replicate 347.832128423274
Condition 2: 8 Hour
Replicate 11.9261642867088
Replicate 22.3093521176492
Replicate 31.6502591694179
Condition 3: 24 Hour
Replicate 156.373892878953
Replicate 256.147765453661
Replicate 354.186714754217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234845.p1 GENE.S_Transcript_234845~~S_Transcript_234845.p1 ORF type:5prime_partial len:155 (+),score=17.72,AMP-binding|PF00501.24|2.9e-36 S_Transcript_234845:1-465(+)
TCCTTTGGGGCGCCCGTCCTGGAGGCCTACGCTATGACGGAGGCCTCCCATTTAATGTGCTCGAACCCCTTACCCCAAGAAGGGCCCCACAAGGCGGGCTCAGTTGGGAGGCCTGTGGGGCAAGAGATGGCGATTTTGGATGAGAATGGGGTTGTCCAAGGACCTGGGTCCAAAGGAGAAGTGTGCATTCGGGGTCCGAATGTAACAAAAGGGTACAAGAATAACCCGGAAGCTAATAAGGCTGCTTTTCAATTCGGGTGGTTCCATACCGGTGATGTTGGTTATTTTGATGAGGAAGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGTACTTTTCTGAACCGTCTTCTTTCACAAAAATATCTGTTACTGTACATGCGTCTAATCATAAAATTAATCCAGTATTATCCTAATAGTCATGAGAAGAGAGGTTTCCTCGAGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234845.p1 GENE.S_Transcript_234845~~S_Transcript_234845.p1 ORF type:5prime_partial len:155 (+),score=17.72,AMP-binding|PF00501.24|2.9e-36 S_Transcript_234845:1-465(+)
SFGAPVLEAYAMTEASHLMCSNPLPQEGPHKAGSVGRPVGQEMAILDENGVVQGPGSKGEVCIRGPNVTKGYKNNPEANKAAFQFGWFHTGDVGYFDEEGYLHLVGRIKELINRGGTFLNRLLSQKYLLLYMRLIIKLIQYYPNSHEKRGFLEW*

Click here to download the sequence:
Link to NCBI Protein BLAST