Transcript Information: S_Transcript_234981.p1


Annotated TAIR IDAT3G03580.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:860695-863343 | Reverse length=882
E-Value6E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46320097086548
Replicate 20.13963790859187
Replicate 30.20427081105254
Condition 2: 8 Hour
Replicate 11.2147374231278
Replicate 21.4159397873245
Replicate 31.1130110300069
Condition 3: 24 Hour
Replicate 10
Replicate 20.10758138406494
Replicate 30.11972489432808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_234981.p1 GENE.S_Transcript_234981~~S_Transcript_234981.p1 ORF type:complete len:632 (+),score=134.99,PPR_2|PF13041.2|7e-07,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|0.0026,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|0.00086,PPR|PF01535.16|0.012,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|0.00042,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.089,PPR|PF01535.16|0.33,PPR|PF01535.16|26,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.67,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.069,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|4.8e+02,TPR_19|PF14559.2|79,TPR_19|PF14559.2|2.4e+02,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|3.1,TPR_19|PF14559.2|0.18,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.2e+03 S_Transcript_234981:176-2071(+)
ATGGTTGGAAGGCAACCTATGTATTCCACATTTAGGGGTGCACACAACCTGTTCGACAAAATTACCCACCGAACAACTTCATTGCACTGCTCCTTTTATGGTACTTTGTCCCACCACTCAGAAGACTCAGTTGAGATTTATTATGAAAACAAGGAGGTCTTTTCTTGGACCTCAAAAATTTCTGGTTTAGTAAAACAGAATAAGCCAAATGATGCTATTAATTTGTTCAAAAGGATGCTTGTGAATGGTTGGAGGCCCAATTATGTCACTGTGTTGAGCATATTGCGTGCAATTGATGCTTTGAGATTGAAGAGTATGGCATATGGGGTTCATGGCTTGATAATCAAGATGGGATTTGAATTAGAAGTATCAGTTGTGACGGCGTTGATTGGTGTTTATGCTGGTTATGACATGTCGGTCTCATGGAAGCTTTTTGCTTATATGCCCTTTAAAGATTTGGTCATGTGGAGCGCTATGATTTCCATGTGTGTGAAGGATGGTGAATACATGGAAGCTATTGAGCTTTTTAGGAAGATGGTGTATGAAGGTATAGGGCCTAATGTTGTGATTGTTGTAAGTATTTTGTCGGCTTGTGCAAAACTTCATGCTCTTCAGTTTGGGAAACAAGTGCATGGTTTTGCTCTAAAAGCAACATTTTATTTGCAAAATAATGTTCGAAACTCACGCATAGACATGTATGCAAAATGTGAGGATCTGAACTATTCATCCCGAGTTTTTGAGGGATTTCAGAGGAAAGATTTTGTAACTTGGAAGACATTGATTTGTGGATGTATTGAGAATGGTCATGCAGTTAAAGCTCTAGGCATCTTCACTGAGATGCAACTAGCTTTCTCTGAACTTGATGATGCCATTCTGTGTGACGTGATTGATGCATCTTCCAATGCAGAAGAGCTCATATTTGGACAGGGATTGCATTGCTTGACTTTAAAATCTGGCTCTATGGTATCAATTTCTGTTGGAACAGCCCTTATGCAAATGTATGCAAAGTTTGGCATGATGGAACAAGCTAGAGAATTGTTCAATCAGCTTCATCCAAAAGATCTTATTGCCTGGAGTGCCATGATATCTGCATATGCTCAAAGCAAATATTCCAGTGAGGCTTTTGATGCATTCAAGCAGATGCAATTAGCAAATGAGAAGCCTAATGAGATCACCTATGTTAGTTTATTACAAGCTTGTTCTTCATTGGGTACTCAAGAGGTTGGTGAAAGCATCCAGTGTTGTGTAACTAAAGCTGGTTACTTGCCTAACACATTTTTAGCTTCAGCTTTAATTGATTTGTACTGTAAACTTGGGAGAGTAGAACAAGCAAGGTCTCTTTTTGATGATATTCCCACCAAAGATCTAATATGCTGGAGTTCACTGATTAAAGGATGTGGATTAAATGGTCTTGGGGATGAGGCGTTGGAGACTTTCTCAAACATGTTGTTTTCTGGAATAATGCCCAATGATGTTGTTTTTGTATCTGTTTTATCTTCCTGCTGTCAATGTGGGTTGGAAGATGAAGGATGGTACTGGTTCTATCACATGCAAGATAAATATGGAATTAAGCCAAAGCTTGCACATTATGCTTGCATGGTTGACTTGCTTAGTCGTCGAGGGAAAGTTCAAGAGGCACTTGATTTTGTGAACAATATGGCTGTGCAACCTGACAAAAGAATATGGGGATCTCTTCTTGCTGGATGCAGATCAACTCATAGTTCAAATGAGGTAGCAGAACATGTGGTGAAGCAGTTTATTGGATTGGATCCAGATGAAACCAGTTATTATGTGATTTTGTCAAACTTGTATGCAAAGGAAGGCAGATGGGATGACGTTGAGAGGGTGAACATGTTGATAGATGAGAAAGAAAATGAGAAAGGTCACAGGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_234981.p1 GENE.S_Transcript_234981~~S_Transcript_234981.p1 ORF type:complete len:632 (+),score=134.99,PPR_2|PF13041.2|7e-07,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|0.0026,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|0.00086,PPR|PF01535.16|0.012,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|0.00042,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.089,PPR|PF01535.16|0.33,PPR|PF01535.16|26,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.67,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.069,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|4.8e+02,TPR_19|PF14559.2|79,TPR_19|PF14559.2|2.4e+02,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|3.1,TPR_19|PF14559.2|0.18,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.2e+03 S_Transcript_234981:176-2071(+)
MVGRQPMYSTFRGAHNLFDKITHRTTSLHCSFYGTLSHHSEDSVEIYYENKEVFSWTSKISGLVKQNKPNDAINLFKRMLVNGWRPNYVTVLSILRAIDALRLKSMAYGVHGLIIKMGFELEVSVVTALIGVYAGYDMSVSWKLFAYMPFKDLVMWSAMISMCVKDGEYMEAIELFRKMVYEGIGPNVVIVVSILSACAKLHALQFGKQVHGFALKATFYLQNNVRNSRIDMYAKCEDLNYSSRVFEGFQRKDFVTWKTLICGCIENGHAVKALGIFTEMQLAFSELDDAILCDVIDASSNAEELIFGQGLHCLTLKSGSMVSISVGTALMQMYAKFGMMEQARELFNQLHPKDLIAWSAMISAYAQSKYSSEAFDAFKQMQLANEKPNEITYVSLLQACSSLGTQEVGESIQCCVTKAGYLPNTFLASALIDLYCKLGRVEQARSLFDDIPTKDLICWSSLIKGCGLNGLGDEALETFSNMLFSGIMPNDVVFVSVLSSCCQCGLEDEGWYWFYHMQDKYGIKPKLAHYACMVDLLSRRGKVQEALDFVNNMAVQPDKRIWGSLLAGCRSTHSSNEVAEHVVKQFIGLDPDETSYYVILSNLYAKEGRWDDVERVNMLIDEKENEKGHRI*

Click here to download the sequence:
Link to NCBI Protein BLAST