Transcript Information: S_Transcript_235210.p1


Annotated TAIR IDAT1G05500.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, SYT5
Annotation TypeOrtholog
Chromosome Positionchr1:1625098-1628940 | Forward length=560
E-Value6.9E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7159222331166
Replicate 29.6141669773198
Replicate 38.965218929528
Condition 2: 8 Hour
Replicate 17.5527424039846
Replicate 28.350603224898
Replicate 39.5847300862677
Condition 3: 24 Hour
Replicate 128.595559291507
Replicate 226.59850108613
Replicate 321.281099966817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_235210.p1 GENE.S_Transcript_235210~~S_Transcript_235210.p1 ORF type:complete len:576 (+),score=90.84,C2|PF00168.26|1.1e-20,C2|PF00168.26|1.9e-25,SMP_LBD|PF17047.1|5.6e-15 S_Transcript_235210:362-2089(+)
ATGGGTTTCGTTTTAGGAATCGTTTTTGGAGTTTCCTTTGGTGTTGGTTTGGTCTTTGCTTTTGCATACCATGAGAATGTTCGCTCCAAACGCCGCTCTGAGTTGGCGGCGACAGTGGCAGCATTTGCTAAGATGACAGTGCAGGATGCAAGAAAGATTTTTCCACCTGAAGCATACCCACCATGGGTTGTTTTCCCACAAATGCAAAAGTTAAATTGGCTTAATGCTCAGCTGGATAAACTTTGGCCTTATATTAATGAGGCAGCATCAGAGCTCATAAGGAGTTCTGTAGAGCCAACTCTTGAGCTATATAGACCAGCTATCTTGGCCTCTCTTAAGTTCTCAAAGCTGACTCTTGGGACTGTTGCCCCTCATTTTACAGGCATTTGTATCATTGATAGCGACCCTGGTGAGATTATCATGGAAATGGAGATGCAGTGGGATGGTAACCCAAATATTGTGCTTGACATAAAAACGCATGTTGGTGTTGCCCTTCCTATACAGGTTAAGAATATAGGATTTACTGGGATCTTTAGGATAATCTTCAAACCATTGGTGGATGAGTTGCCTTGTTTTGGCGCTGTATGTTATTCTTTAAGAGAAAAGAAAAACTTGGACTTCACCCTCAAAGTTATCGGCGGTGACTTATCAGCGGTTCCAGGAATTTCGGATGCCATTGATGAAACCATAAGAGATGCTATAGAAGATTCAATAACATGGCCGGTTCGTCAGATAATACAAATAATACCTGGAGATTACAGCGAATTGGAATTGAAGCCTTGTGGTATAGTAGAGGTTAGGCTTGTGCAAGCAAAAGAGCTGTCAAATAAAGACCTCATTGGAAAGTCCGATCCTTTTGCTGCTGTATTTATACGCCCATTACGTAACAGCACAAAAAAGACCAAAACAATTAACAACCAATTGAATCCAATATGGAATGAGAGTTTTGAGTTCGTAGTCGAGGACCCATTGACACAGTTTGTGACTGTTCGAGTGTATGATGATGAAGGGCTTCAACCTCCTGAGCTAATTGGTTGTGGGAGAGTAGCACTGAGGGACCTTGAGCCAGGTAAAGTGAAGGTCGCATGGTTGAACCTAGTGAAGGATCTGGAGGTTCAGAGAGATACAAAGTACAGGGGTCAGGTGCATCTGGAGCTCCTGTATTGCCCATTTGGCACAGAAAATCAAATTATAAATCCTTTTCACCGTGATCTGCCATTGACCTCAGTGGAGAATCTCTTGAAAGAGGATGGCGGAGAAGATGCCGATGATATCGAAAGAAAAGCCTCCGAAAGGAAGCGTGAAGTAATCCTTAGAGGGGTACTCTCTCTAACAGTTGTATCTGCTGAAAACTTGCCAGTTATGGATCTGAATGGGAAGTCTGATCCCTATGTGGTCGTGACACTGAAAAAGGCCGGAACCAAAGTAAAAACAAGGGTTTTAAATGAAACTCTGAATCCAGTTTGGAACCAAACCTTCGACTTCTTAGTGGAGGATGCACTGCATGAATTACTCATCTTCGAGGTCTATGACCATGACACGATTGGAAAGAATTATATTGGGAGATACATCATGACTTTAACCAGAATACTGCTTGAAGGAGAATTCTATGACATCTTCACGCTAGACGGAACCAAGAACGCGAGACTTGCTTTGCATCTCAGGTGGAACCCGCAACCAATTGCGAGGGAACCAAGCGGCAGAAAGTCAATTGCAGAACCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_235210.p1 GENE.S_Transcript_235210~~S_Transcript_235210.p1 ORF type:complete len:576 (+),score=90.84,C2|PF00168.26|1.1e-20,C2|PF00168.26|1.9e-25,SMP_LBD|PF17047.1|5.6e-15 S_Transcript_235210:362-2089(+)
MGFVLGIVFGVSFGVGLVFAFAYHENVRSKRRSELAATVAAFAKMTVQDARKIFPPEAYPPWVVFPQMQKLNWLNAQLDKLWPYINEAASELIRSSVEPTLELYRPAILASLKFSKLTLGTVAPHFTGICIIDSDPGEIIMEMEMQWDGNPNIVLDIKTHVGVALPIQVKNIGFTGIFRIIFKPLVDELPCFGAVCYSLREKKNLDFTLKVIGGDLSAVPGISDAIDETIRDAIEDSITWPVRQIIQIIPGDYSELELKPCGIVEVRLVQAKELSNKDLIGKSDPFAAVFIRPLRNSTKKTKTINNQLNPIWNESFEFVVEDPLTQFVTVRVYDDEGLQPPELIGCGRVALRDLEPGKVKVAWLNLVKDLEVQRDTKYRGQVHLELLYCPFGTENQIINPFHRDLPLTSVENLLKEDGGEDADDIERKASERKREVILRGVLSLTVVSAENLPVMDLNGKSDPYVVVTLKKAGTKVKTRVLNETLNPVWNQTFDFLVEDALHELLIFEVYDHDTIGKNYIGRYIMTLTRILLEGEFYDIFTLDGTKNARLALHLRWNPQPIAREPSGRKSIAEPL*

Click here to download the sequence:
Link to NCBI Protein BLAST