Transcript Information: S_Transcript_23533.p1


Annotated TAIR IDAT3G06720.1
Annotated Gene Nameimportin alpha isoform 1
Annotated Gene Symbol(s)AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1
Annotation TypeOrtholog
Chromosome Positionchr3:2120559-2123555 | Forward length=532
E-Value3.6E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.975784185724
Replicate 237.257418613117
Replicate 334.683354425876
Condition 2: 8 Hour
Replicate 123.59888608655
Replicate 221.704032262421
Replicate 323.1792799116
Condition 3: 24 Hour
Replicate 128.784942424706
Replicate 229.574099540991
Replicate 326.02871959931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23533.p1 GENE.S_Transcript_23533~~S_Transcript_23533.p1 ORF type:5prime_partial len:469 (+),score=126.30,Arm|PF00514.19|1.9e-10,Arm|PF00514.19|3.9e-12,Arm|PF00514.19|3.9e-06,Arm|PF00514.19|9.1e-08,Arm|PF00514.19|2e-07,Arm|PF00514.19|1.6e-08,Arm|PF00514.19|1.2e-11,Arm|PF00514.19|1.3e-06,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|1.2e-08,HEAT_EZ|PF13513.2|5.8e-05,HEAT_EZ|PF13513.2|3.4e+02,HEAT_EZ|PF13513.2|0.23,HEAT_EZ|PF13513.2|2.4e+02,HEAT_2|PF13646.2|1,HEAT_2|PF13646.2|2.1e-07,HEAT_2|PF13646.2|0.029,HEAT_2|PF13646.2|0.0042,HEAT_2|PF13646.2|0.044,HEAT_2|PF13646.2|1.6e+02,Arm_3|PF16186.1|6.6e+03,Arm_3|PF16186.1|2e-20,HEAT|PF02985.18|53,HEAT|PF02985.18|0.00042,HEAT|PF02985.18|3.8e+03,HEAT|PF02985.18|23,HEAT|PF02985.18|8.8,HEAT|PF02985.18|1.1e+03,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|9e+03,Arm_2|PF04826.9|37,Arm_2|PF04826.9|4.2,Arm_2|PF04826.9|0.074,Arm_2|PF04826.9|5.6,V-ATPase_H_C|PF11698.4|1.4e+02,V-ATPase_H_C|PF11698.4|0.17,V-ATPase_H_C|PF11698.4|1e+03,V-ATPase_H_C|PF11698.4|23 S_Transcript_23533:1-1407(+)
TTCCCTAGCCCTGCTGTCGACCAGAAATTGGAGCAGCTATCTGCAATGGTTGCAGGACTTTATGCTGATGATAGGAATCTTCAGCTGGAGGCTACTACACAATTCCGTAAATTGCTTTCTATAGAGCGCTGTCCCCCAATCAATGAAGTCATTCAGGCTGGTGTGGTTCCGCGTTTTGTCGAGTTCTTAACACAAGAGGACTTTCCCCAACTTCAGTTTGAGGCTGCTTGGGCTCTGACAAATATTGCCTCTGGGACATCAGAGAACACTAAGGCAGTGATTGATCATGGTGCGGCTCCAGTCTTTGTGAAATTACTTGGCTCCGCGAGTGATGATGTCCGTGAGCAGGCTGTTTGGGCTTTAGGAAACATAGCGGGTGATTCTCCAAAGTGTCGCGATTTTGTGCTTGAGCATGCAGCTTTGGTTCCGTTGATGGCACAATTGAATGAGAATGCGAAACTTTCAATGCTGAGAAATGCTACCTGGACACTTTCAAACTTCTGCAGGGGCAAGCCTCAGCCTTTATTTGAGCAGGTGAAACCTGCCCTTCCAGTTCTTCGGAGTCTCATCCATTCCAATGATGAAGAAGTGTTAACTGATGCATGCTGGGCTCTCTCATATCTATCAGATGGTACCAATGATAAAATTCAAGCTGTTATAGAGGCTGGTGTATGTCATCGGCTTGTTGAGCTTTTACGCCACCCATCTCCTGCTGTGCTCATCCCTGCACTTCGAACTGTTGGAAACATTGTGACTGGAGATGATATCCAAACTCAGTGCATCATCAATCTCCAAGCTCTTCCCTGCCTTCTTAACCTTCTTACTGGGAACTATAAGAAGAGCATTAAAAAGGAGACTTGCTGGACTCTGTCAAACATCACAGCAGGCAACAAGGAGCAAATTCAGGCGGTAATTGAGGCTGGTATAATTGGTCCCCTTGTACACGTCCTTCAAAATGCAGAGTTTGATATTAAAAAGGAAGCTGCTTGGGCAATTTCTAATGCTACATCTGGTGGCACTGCTGAGCAAATCAAGTTCCTTGTGAATCAGGGATGCATCAAGCCACTTTGTGATCTGCTTGTTTGCCCTGATCCAAGAATTATCACAGTCTGCTTGGAAGGACTTGAAAACATTCTCAAAATTGGGGAAGCTGAAAAGAATGTGGGTACTTCTGGAGGTGTGAATCTCTATGCTCAATTGATAGATGATGCGGAGGGTTTGGAGAAAATTGAAAACCTGCAGAGTCATGATAACAACGACATTTATGAAAAAGCTGTGAAGATTCTTGAAACTTATTGGTTGGAGGAAGAAGATGAGGTAGTGCCCTCCGCTGATGGCCAGCAGCCTGGTTTCCAGTTTGGTGGCAATGGGACAAGTGTTCCATCTGGAGGATTCAACTTCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23533.p1 GENE.S_Transcript_23533~~S_Transcript_23533.p1 ORF type:5prime_partial len:469 (+),score=126.30,Arm|PF00514.19|1.9e-10,Arm|PF00514.19|3.9e-12,Arm|PF00514.19|3.9e-06,Arm|PF00514.19|9.1e-08,Arm|PF00514.19|2e-07,Arm|PF00514.19|1.6e-08,Arm|PF00514.19|1.2e-11,Arm|PF00514.19|1.3e-06,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|1.2e-08,HEAT_EZ|PF13513.2|5.8e-05,HEAT_EZ|PF13513.2|3.4e+02,HEAT_EZ|PF13513.2|0.23,HEAT_EZ|PF13513.2|2.4e+02,HEAT_2|PF13646.2|1,HEAT_2|PF13646.2|2.1e-07,HEAT_2|PF13646.2|0.029,HEAT_2|PF13646.2|0.0042,HEAT_2|PF13646.2|0.044,HEAT_2|PF13646.2|1.6e+02,Arm_3|PF16186.1|6.6e+03,Arm_3|PF16186.1|2e-20,HEAT|PF02985.18|53,HEAT|PF02985.18|0.00042,HEAT|PF02985.18|3.8e+03,HEAT|PF02985.18|23,HEAT|PF02985.18|8.8,HEAT|PF02985.18|1.1e+03,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|9e+03,Arm_2|PF04826.9|37,Arm_2|PF04826.9|4.2,Arm_2|PF04826.9|0.074,Arm_2|PF04826.9|5.6,V-ATPase_H_C|PF11698.4|1.4e+02,V-ATPase_H_C|PF11698.4|0.17,V-ATPase_H_C|PF11698.4|1e+03,V-ATPase_H_C|PF11698.4|23 S_Transcript_23533:1-1407(+)
FPSPAVDQKLEQLSAMVAGLYADDRNLQLEATTQFRKLLSIERCPPINEVIQAGVVPRFVEFLTQEDFPQLQFEAAWALTNIASGTSENTKAVIDHGAAPVFVKLLGSASDDVREQAVWALGNIAGDSPKCRDFVLEHAALVPLMAQLNENAKLSMLRNATWTLSNFCRGKPQPLFEQVKPALPVLRSLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCHRLVELLRHPSPAVLIPALRTVGNIVTGDDIQTQCIINLQALPCLLNLLTGNYKKSIKKETCWTLSNITAGNKEQIQAVIEAGIIGPLVHVLQNAEFDIKKEAAWAISNATSGGTAEQIKFLVNQGCIKPLCDLLVCPDPRIITVCLEGLENILKIGEAEKNVGTSGGVNLYAQLIDDAEGLEKIENLQSHDNNDIYEKAVKILETYWLEEEDEVVPSADGQQPGFQFGGNGTSVPSGGFNFS*

Click here to download the sequence:
Link to NCBI Protein BLAST