Transcript Information: S_Transcript_23542.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.235862636865
Replicate 210.397406573082
Replicate 37.20750605566
Condition 2: 8 Hour
Replicate 110.785254873033
Replicate 211.31449816262
Replicate 38.3303312479237
Condition 3: 24 Hour
Replicate 110.79689643788
Replicate 26.7730931147705
Replicate 38.9871652478


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23542.p1 GENE.S_Transcript_23542~~S_Transcript_23542.p1 ORF type:complete len:87 (+),score=3.32 S_Transcript_23542:982-1242(+)
ATGCAGTTTCTGATACAATCAACTGTATTTTTCTCGGTTCTGTACTATCTTCTAACATCAGAATCCGGTGGAGTGATCGAACAAATCATGAAAATCATACCAGCACCAACATCTATGAAAAATCGATGTGTTCAGGCTCTCAACAATGCAATCTCAGGGGTGCTATACAGAGATAGCATTTTTTCAGTGCTCTTTCACTTGGCTTCTTTGCAGACTTTTCTCTATACACTAATATTTTGCTTTTTTTTCAGGAATGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23542.p1 GENE.S_Transcript_23542~~S_Transcript_23542.p1 ORF type:complete len:87 (+),score=3.32 S_Transcript_23542:982-1242(+)
MQFLIQSTVFFSVLYYLLTSESGGVIEQIMKIIPAPTSMKNRCVQALNNAISGVLYRDSIFSVLFHLASLQTFLYTLIFCFFFRND*

Click here to download the sequence:
Link to NCBI Protein BLAST