Transcript Information: S_Transcript_235820.p1


Annotated TAIR IDAT4G39540.3
Annotated Gene Nameshikimate kinase 2
Annotated Gene Symbol(s)SK2
Annotation TypeHomolog
Chromosome Positionchr4:18378561-18380253 | Forward length=308
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.2065588039266
Replicate 30.14408387565313
Condition 2: 8 Hour
Replicate 10.3332092237052
Replicate 20.34956013499573
Replicate 30.49959017824175
Condition 3: 24 Hour
Replicate 10.17066315227027
Replicate 20.35412205588043
Replicate 30.19704722191497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_235820.p1 GENE.S_Transcript_235820~~S_Transcript_235820.p1 ORF type:5prime_partial len:128 (+),score=8.03 S_Transcript_235820:2-385(+)
ATCGATTGCTTAGCACGGAGAATTTCAGCCGTAGGAACTGGTTCTCGCCCCTTATTGGACGGTGAATCAGGGGATGCTTACACTAAGGTTTGTGGCTTGTTGTTTGTATTAGACTGTAAATCTGTTGCACCTCTTTGTGGGATCTTGACTTCCAAGTTCCAAGCAAACTCGTTCCAGTTCCTATTTATCGAACTTGTGATTTTGACCGCCTTGCAGGCTTTTAAACGTTTGTCCACACTATTTCAAGAAAGGGGGGAAGCATATGCCAAAGCTAGTACCCGAGTTTCTTTGGAATGTATGCTCTTGTTACTTCATGCGTTCATCAAACTCGTTCATTCTCTTCACAATTTTGTGAAGATCACCATGAATATTAGGATAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_235820.p1 GENE.S_Transcript_235820~~S_Transcript_235820.p1 ORF type:5prime_partial len:128 (+),score=8.03 S_Transcript_235820:2-385(+)
IDCLARRISAVGTGSRPLLDGESGDAYTKVCGLLFVLDCKSVAPLCGILTSKFQANSFQFLFIELVILTALQAFKRLSTLFQERGEAYAKASTRVSLECMLLLLHAFIKLVHSLHNFVKITMNIRII*

Click here to download the sequence:
Link to NCBI Protein BLAST