Transcript Information: S_Transcript_235822.p1


Annotated TAIR IDAT4G39540.3
Annotated Gene Nameshikimate kinase 2
Annotated Gene Symbol(s)SK2
Annotation TypeOrtholog
Chromosome Positionchr4:18378561-18380253 | Forward length=308
E-Value1.9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 21.0506090265483
Replicate 30.3512902111162
Condition 2: 8 Hour
Replicate 11.8278905986114
Replicate 21.4914565759818
Replicate 30
Condition 3: 24 Hour
Replicate 11.2482790566054
Replicate 20.21584582453664
Replicate 30.24020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_235822.p1 GENE.S_Transcript_235822~~S_Transcript_235822.p1 ORF type:5prime_partial len:105 (-),score=5.60,SKI|PF01202.18|5.4e-09 S_Transcript_235822:121-435(-)
ATCAGGCCCATCAACTGGAAGCACATGCAAAGCGGTATCAGTGTCTGGCTAGATGTACCAATCGATTGCTTAGCACGGAGAATTTCAGCCGTAGGAACTGGTTCTCGCCCCTTATTGGACGGTGAATCAGGGGATGCTTACACTAAGGCTTTTAAACGTTTGTCCACACTATTTCAAGAAAGGGGGGAAGCATATGCCAAAGCTAGTACCCGAGTTTCTTTGGAATGTATGCTCTTGTTACTTCATGCGTTCATCAAACTTGTTCATTCTCTTCACAATTTTGTGAAGATCACCATGAATATTAGGATAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_235822.p1 GENE.S_Transcript_235822~~S_Transcript_235822.p1 ORF type:5prime_partial len:105 (-),score=5.60,SKI|PF01202.18|5.4e-09 S_Transcript_235822:121-435(-)
IRPINWKHMQSGISVWLDVPIDCLARRISAVGTGSRPLLDGESGDAYTKAFKRLSTLFQERGEAYAKASTRVSLECMLLLLHAFIKLVHSLHNFVKITMNIRII*

Click here to download the sequence:
Link to NCBI Protein BLAST