Transcript Information: S_Transcript_235834.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeOrtholog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value3.5E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.101983940613
Replicate 217.11874707964
Replicate 315.756399175065
Condition 2: 8 Hour
Replicate 116.66606134028
Replicate 212.658581023039
Replicate 317.375102669607
Condition 3: 24 Hour
Replicate 116.398960155404
Replicate 216.505857170449
Replicate 314.55389677158


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_235834.p1 GENE.S_Transcript_235834~~S_Transcript_235834.p1 ORF type:complete len:357 (+),score=48.65,Peptidase_C14|PF00656.18|1.4e-60,zf-LSD1|PF06943.8|2e-10 S_Transcript_235834:258-1328(+)
ATGTTGATGCTGGTAGACTGCTCCAATTGCCGGACCCCACTACAGATGCCACCTGGCGCCCGATCCATCCGCTGCGCCGTCTGTCAGGCCATTACCCAAATTACCCCTGACCCACGCGCCATCCCTCCTCCTAGCGCAACCCACGCGCCTCCCCCTCCTTCTCCCTACTCTCACGCGCCGCCGGGCCCTCCGCCCTCCCCTCATGGCCGGAAAAAGGCTGTCGTTTGTGGGATTTCTTATAAGTTCTCCAGACATGAGCTTAAAGGGTGTATAAATGATGCTAAGTGTATGAGATATTTGTTGATTAATAAATTTCACTTTCCCTCTGATTCCATCATCATGCTTACTGAGGAAGAAACTGATCCATACAAGATTCCTTCAAAGCACAATATTAGGATGGCACTCTATTGGCTTGTAGCAGGCTGTCAGCCAGGGGACTCCCTGGTGTTTCACTATTCTGGCCATGGTTCACGGCAGAGGAATTATAATGGTGATGAAGTTGATGGATATGATGAAACTCTGTGCCCTTTGGACTTTGAAACACAGGGGATGATTGTTGATGATGAAATAAATGCAGCGATAGTCAGACCTCTTCCACCTGGGGTTAAGCTTCATGCCATAATAGATGCTTGTCACAGTGGCACTGTACTGGACTTACCATTCCTTTGCAGGATGAACAGGTCTGGTCAGTATGTTTGGGAGGATCATCGCCCTCAGTCAGGCACATGGAAAGGAACCAGTGGTGGTGAAGTCATCTCATTTAGTGGCTGCGATGATGACCAAACCTCCGCTGATACAGCTGCTCTGTCAAAAATTACTTCAACAGGGGCCATGACGTATTGTTTTATCCAAGCAATTGAACGTGGACAAGCTAGTACTTATGGGAGCATGCTAAATTCCATGCGTACAGCTATTCGAGGCACTGGTGGGAACTCTGGTGGCGATATTGGCATTACATCCCTTTTATCCATGCTAGTCACTGGAGGCAGCTTAAGTGGGGGGCTCACACAGGAGCCCCAATTGACCTCTTGTGAGCCATTTGACGTGTATATGAAACCCTTCTCGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_235834.p1 GENE.S_Transcript_235834~~S_Transcript_235834.p1 ORF type:complete len:357 (+),score=48.65,Peptidase_C14|PF00656.18|1.4e-60,zf-LSD1|PF06943.8|2e-10 S_Transcript_235834:258-1328(+)
MLMLVDCSNCRTPLQMPPGARSIRCAVCQAITQITPDPRAIPPPSATHAPPPPSPYSHAPPGPPPSPHGRKKAVVCGISYKFSRHELKGCINDAKCMRYLLINKFHFPSDSIIMLTEEETDPYKIPSKHNIRMALYWLVAGCQPGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVDDEINAAIVRPLPPGVKLHAIIDACHSGTVLDLPFLCRMNRSGQYVWEDHRPQSGTWKGTSGGEVISFSGCDDDQTSADTAALSKITSTGAMTYCFIQAIERGQASTYGSMLNSMRTAIRGTGGNSGGDIGITSLLSMLVTGGSLSGGLTQEPQLTSCEPFDVYMKPFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST