Transcript Information: S_Transcript_23606.p1


Annotated TAIR IDAT5G63830.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25543585-25544802 | Reverse length=405
E-Value8.9E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.274124703679
Replicate 212.829700010331
Replicate 312.833631435304
Condition 2: 8 Hour
Replicate 116.396163844803
Replicate 215.839922029588
Replicate 314.469881950827
Condition 3: 24 Hour
Replicate 112.224630663836
Replicate 29.4294690500131
Replicate 310.923415825087


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23606.p1 GENE.S_Transcript_23606~~S_Transcript_23606.p1 ORF type:complete len:411 (+),score=88.07,zf-HIT|PF04438.12|3.7e-10,zf-HIT|PF04438.12|5.4e+03,zf-HIT|PF04438.12|7.6e+03,SHQ1|PF04925.11|2e-05,SHQ1|PF04925.11|1.9e+03 S_Transcript_23606:120-1352(+)
ATGGCGGTAGAGGACACAGTAGCTACCTCTGGGAATCCCTCAACTTCTTCTCAGTTCAGCTCTGCTTCTCGCGTCATCTGTCGCGTATGTCAAAAGCAATTTTCACAGTATACTTGTCCTCGCTGCAACATTAAGTACTGCTCACTTCACTGCTATAAGTCTCATAGCCTACGATGTACTGAATCCTTTATGCGAGAGAATGTTGTGGATGAGCTGAGGCAGTTGCGCCCAGATGATGAAAGCAAGAAAAAGATGTTGGAGATACTAAAGAAATTTCATGCTGAAGATGAGGAGGATAGTATGGATGAGGACGAGCCGAGTCTTTCAGAGGAGACGATCCAAAAGGTTCTATCAGGAGGCAAACTTAGTTATGATGACTTAACTGCTGAAGAGAAGAAACTTTTCCAAAGAGCTATTGCATCTGGAGAGTTAAGTAAGATGATTGAACCATGGGAGCCATGGTGGTTGAAGCCTTCTGCTCGAGCAATATCCCTTGGCCAGGAGGGAGCCCGGCTCATACAGTCCGTAGCTAGTGAAGGAACAACAGGATCCCATCAAGTTGATTCAGAACATGAGCGAGCTTGTGAAATACCAGCTGGGCCAGAAGCCCTATTGCCATCACTCAGTAAGCTTACCACTGCCGAGCCATCCCCACTTCTTGCCATTTTTCTGGTCGACATCTTATACAGCTATTGCTTCACCCTTCGTCTTTATAATGGGGATTGGCAATCAGATTCTGCTGGAGCTTCTATGGTGGTTTTTAGCGTGTCCTCCGTTTTGGGCCAAAGAGCACAGCCAGAATCCATGCTAGAAGCTGTAACATATTGCTTGGAGCAGACTTGTTCTCCATCCTTTAGAGACATGGGAGGTCTGGAGTTCGGACTTGGTGTTCTCGATGATGTGACAGTCCTACTTTCCTTGGGAGGAGCTGCCCTGATTTGCGCACTTTGTGACCTACAAAGGCTGATTCAGGCAGCTTTCAGAGAGCTTAAATCAGAGAAGCCACGAAGAGCGAAGAGGGCAGAAATCAGGGGCAAGCTCAAGCCTGCAGAAAGAAAGATTTACTTCATTATGTGCTGGGTGCATGAGCAACAAGAGGAAGTTTGGTCTTCCTTGGAAGTGCTTGTTAAGGCAGAAAAGGCTTCAGCATTGGAGTATAAAGGCAATGTTAGAAGTTCCTCAAAGACGATGGATGCAAACAGTAAAAGCAAGCCTGTAATTGAGGAGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23606.p1 GENE.S_Transcript_23606~~S_Transcript_23606.p1 ORF type:complete len:411 (+),score=88.07,zf-HIT|PF04438.12|3.7e-10,zf-HIT|PF04438.12|5.4e+03,zf-HIT|PF04438.12|7.6e+03,SHQ1|PF04925.11|2e-05,SHQ1|PF04925.11|1.9e+03 S_Transcript_23606:120-1352(+)
MAVEDTVATSGNPSTSSQFSSASRVICRVCQKQFSQYTCPRCNIKYCSLHCYKSHSLRCTESFMRENVVDELRQLRPDDESKKKMLEILKKFHAEDEEDSMDEDEPSLSEETIQKVLSGGKLSYDDLTAEEKKLFQRAIASGELSKMIEPWEPWWLKPSARAISLGQEGARLIQSVASEGTTGSHQVDSEHERACEIPAGPEALLPSLSKLTTAEPSPLLAIFLVDILYSYCFTLRLYNGDWQSDSAGASMVVFSVSSVLGQRAQPESMLEAVTYCLEQTCSPSFRDMGGLEFGLGVLDDVTVLLSLGGAALICALCDLQRLIQAAFRELKSEKPRRAKRAEIRGKLKPAERKIYFIMCWVHEQQEEVWSSLEVLVKAEKASALEYKGNVRSSSKTMDANSKSKPVIEEV*

Click here to download the sequence:
Link to NCBI Protein BLAST