Transcript Information: S_Transcript_236289.p1


Annotated TAIR IDAT2G27610.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11783927-11786533 | Reverse length=868
E-Value3E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.066856938053075
Replicate 30.055887079041214
Condition 2: 8 Hour
Replicate 10.64622394900403
Replicate 20.74572828799089
Replicate 30.96890216386279
Condition 3: 24 Hour
Replicate 10.26478646655266
Replicate 20.41206930138813
Replicate 30.076430437591261


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236289.p1 GENE.S_Transcript_236289~~S_Transcript_236289.p1 ORF type:complete len:330 (+),score=67.50,DYW_deaminase|PF14432.2|7.7e-47,PPR|PF01535.16|11,PPR|PF01535.16|4.3e-11,PPR|PF01535.16|0.024,PPR|PF01535.16|8e-05,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|42,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|0.052,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|3.7e+03,PPR_1|PF12854.3|39,PPR_1|PF12854.3|8.9e-07,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|4.6e+03 S_Transcript_236289:1075-2064(+)
ATGTACTCAAAGAGGGGTAATATTGATAGTGCACATAAAGTCTTTGAAAGACAAGCGGAAAGAGATTTAGTTTCTTGGAACTCTATGATCTCAGGATATGCGCAACATGGTTACGGCCATAAGGCTCTTGAAGTATTTGAGGAGATGCGAAGGAAAAAAATACAGACAGATGGTATTACATTCATTGGTGTGATTTGTGCCTGCACGCATGCTGGGCTTGTAGAAGAAGGTCAAAAATATTTTGATCTAATGGTCAAGGAGCAACATGTTAATCCCACCATGGAACACTATGCTTGTATGGTGGATCTTTATGGACGTGCTGGGATGTTGGATAAAGCCATGGACCTCATAAATGAGATGCCATTCCCAGCTGGTCCAACAGTGTGGCGAAGTCTCTTGGGTGCTTGCCATGTTCTCAGGAATGTAGAACTTGGTAAGCTTGCTGCAGAAGAACTCATTTCCCTTGAGCCACAAGATTCATCTGCCTATGTTTTATTATCAAACATCTACGCGGCTACTGGACACTGGAAGGAGAGGGCCAAAGTCAGGAAGTTAATGGATCAGAAGAAAGTGAGAAAGGAAGCTGGATACAGCTGGATTGAGGTCAAGAAGAAGACTTACTCGTTTTTGGCTGGTGATCATTCTCATCCAATGTCAGATCAAATATATTCAAAGCTTGATGATCTATCTAAGCGGCTGAAAGATGCAGGATACTGCCCTGACACCAATTATGTGCTCCATGATGTGGAAGATGAGCATAAAGAAGCTATTTTGTCTCAACATAGTGAAAGATTGGCCATTGCATTTGGACTAATTGCAACTTCCCCTGGTACTCCCCTCCAAATTGTGAAGAATCTTCGAGTATGTGGAGATTGTCATGTTGTTATTAAGCTTATCTCTAAGATTGAGGAACGGGATATTACTGTTCGGGATTCAAACCGATTTCATCACTTCAGGGGAGGCTTATGCTCATGTGGAGACTTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236289.p1 GENE.S_Transcript_236289~~S_Transcript_236289.p1 ORF type:complete len:330 (+),score=67.50,DYW_deaminase|PF14432.2|7.7e-47,PPR|PF01535.16|11,PPR|PF01535.16|4.3e-11,PPR|PF01535.16|0.024,PPR|PF01535.16|8e-05,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|42,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|0.052,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|3.7e+03,PPR_1|PF12854.3|39,PPR_1|PF12854.3|8.9e-07,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|4.6e+03 S_Transcript_236289:1075-2064(+)
MYSKRGNIDSAHKVFERQAERDLVSWNSMISGYAQHGYGHKALEVFEEMRRKKIQTDGITFIGVICACTHAGLVEEGQKYFDLMVKEQHVNPTMEHYACMVDLYGRAGMLDKAMDLINEMPFPAGPTVWRSLLGACHVLRNVELGKLAAEELISLEPQDSSAYVLLSNIYAATGHWKERAKVRKLMDQKKVRKEAGYSWIEVKKKTYSFLAGDHSHPMSDQIYSKLDDLSKRLKDAGYCPDTNYVLHDVEDEHKEAILSQHSERLAIAFGLIATSPGTPLQIVKNLRVCGDCHVVIKLISKIEERDITVRDSNRFHHFRGGLCSCGDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST