Transcript Information: S_Transcript_236289.p2


Annotated TAIR IDAT2G27610.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11783927-11786533 | Reverse length=868
E-Value7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.21282433656767
Replicate 30.17790420659422
Condition 2: 8 Hour
Replicate 10.54856309497448
Replicate 20.64741684166411
Replicate 30.61685732618917
Condition 3: 24 Hour
Replicate 10
Replicate 20.14574798441381
Replicate 30.40549910619158


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236289.p2 GENE.S_Transcript_236289~~S_Transcript_236289.p2 ORF type:5prime_partial len:311 (+),score=54.42,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.8e-12,PPR_2|PF13041.2|10,PPR_2|PF13041.2|0.00098,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.00065,PPR|PF01535.16|0.0078,PPR|PF01535.16|0.17,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|0.42,PPR|PF01535.16|7.7e-05,PPR_3|PF13812.2|68,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|27,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.71,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|0.0099,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|0.99 S_Transcript_236289:1-933(+)
TTCACCCGCATGAAAATGGAGGGAATTAACCCTCATCCATTTACTTATGCAACTGTGTTTGGTGCCTTAGCAGATTATGGTATGACTGTGGAAGGCACTGAAGTTCATGCACATGTTATCAAAAGTGGTCTTGAAACAAGCACTCCCGTGGGTAATTCATTAGTTAATATGTATGCAAAGTCTGGGATGGTAAAAGAGGCTAGAGCTATGTTTACTGCCATGGAAAACAAGAATGCTGTTTCTTGGAGCAGTATGATCGCAGGTCTTGTGACAAATGGGTTTGATCAGGAAGCTCTTCACCTGTTCCAAAGGTCGACGAGCCTTGAAGATGTACCGCTTACACAGCCAATGTTTGCTACAATCACTAAAGCTTGTGCTAATATAAAGGACTTATCTTTTACAAGACAGCTCCACTCCCAAGTTACCAAGAGTGGATTTGACTTTGATCTTAATATAAGGACAGGTCTTATGGTTGCTTATAGTAAGTGTGGTGACATGGGTGGTTCATTTAAGATGTTCTCAACGATGAGACAAAGCCAAAGTGTGATCTCCTGGACAGCCATGATTACTGGATACTTGCAGAATGGTGGAAAGGAGAAAGCAGTTCAGATATTTCTTGAGATGAACAGGATGGGTATTAGACCAAATGATTTTACTTACTCGGCTATTCTTACTGCTCATTCGTGTGTTTCACCATTTCAGATACATGCACATGTGATGAAAACAAATTATCTGAACTCACCAAATGTCGGAACTGCTCTTTTGGATGCCTATCTCAAGACTGGAAATGCAATTGAAGCTGGCAAAGTATTTGAAGTTATTTCTAACAAGGACATTGTAGCATGGTCTGCTATGTTGGTTGGATATGCTCAAGTCGGAGACACAGAGAGAGCTATAAACATATTTCGTCAGCTGGTAAAGGAGGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236289.p2 GENE.S_Transcript_236289~~S_Transcript_236289.p2 ORF type:5prime_partial len:311 (+),score=54.42,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.8e-12,PPR_2|PF13041.2|10,PPR_2|PF13041.2|0.00098,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.00065,PPR|PF01535.16|0.0078,PPR|PF01535.16|0.17,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|0.42,PPR|PF01535.16|7.7e-05,PPR_3|PF13812.2|68,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|27,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.71,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|0.0099,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|0.99 S_Transcript_236289:1-933(+)
FTRMKMEGINPHPFTYATVFGALADYGMTVEGTEVHAHVIKSGLETSTPVGNSLVNMYAKSGMVKEARAMFTAMENKNAVSWSSMIAGLVTNGFDQEALHLFQRSTSLEDVPLTQPMFATITKACANIKDLSFTRQLHSQVTKSGFDFDLNIRTGLMVAYSKCGDMGGSFKMFSTMRQSQSVISWTAMITGYLQNGGKEKAVQIFLEMNRMGIRPNDFTYSAILTAHSCVSPFQIHAHVMKTNYLNSPNVGTALLDAYLKTGNAIEAGKVFEVISNKDIVAWSAMLVGYAQVGDTERAINIFRQLVKEGF*

Click here to download the sequence:
Link to NCBI Protein BLAST