Transcript Information: S_Transcript_23632.p1


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeOrtholog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value1.1e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5919259337569
Replicate 25.5755576711239
Replicate 36.7480398693484
Condition 2: 8 Hour
Replicate 111.869480812172
Replicate 29.6077551522547
Replicate 39.0220564281549
Condition 3: 24 Hour
Replicate 16.6720031746466
Replicate 27.3437777045839
Replicate 36.5694627287744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23632.p1 GENE.S_Transcript_23632~~S_Transcript_23632.p1 ORF type:3prime_partial len:645 (+),score=116.65,Hist_deacetyl|PF00850.15|6.4e-90 S_Transcript_23632:166-2097(+)
ATGGAGGGAGAAGCGAAGTCAGAGAGAGTGACGAAACGCGTAGGGTTAGTGTACGACGAAAGGATGTGCAAGCATGATACTCCTGACGGCGATGAACATCCTGAATCTCCTCTTCGAATTAGGGCTATCGTTAAGAAGCTTCTCGATTCTGGCCTTCTTTCTAGGTGTGCTCTTTTGAATGCAAAAGAAGCAGAAGATAAATTTATAGAGTTAGTTCATTCGAAATATCATGTTGACTTGATTAAGAATATAAGCTCCAAGCAGTTTGATTCTCGTAGGGACAGAATTGCATCTAAATTTAATTCCATTTATTTGAACAAAGGCTCATCACAAGCTGCTTATCTGGCTGCGGGCTCTGTCCTAGAGGCTGCAGAGAGAGTTGCCAAGGGGGATCTTGATTCTGCTTTCGCAATTGTGAGGCCTCCTGGGCATCATGCGGAAGAGAATGAGCCAATGGGTTTTTGCTTATTCAATAATGTAGCTATCGCAGCTAGTTATCTGCTGAATGAAAGACCAGAATTGGGCATTCACAAAATTTTGATTGTTGATTGGGACGTTCATCATGGTAATGGTACTCAAAAAATGTTTTGGAAGGACTCTCGTGTTCTTTTCTTCTCTGTTCACAGGCACGAGTTTGGATGTTTTTATCCTGGAACTGATGATGGCTCCCATATTATGATTGGAGAAGGGCCAGGAGAAGGATACAATATTAACATTCCTTGGGAACATGGCCACTGTGGTGATCCAGACTATTTTGCAGTTTGGGATCATGTATTGATTCCAGTTGCTAAGGAGTTCAACCCAGACTTTATTATAGTCTCCGCAGGGTTTGATGCAGCTGTTCGTGACCCTCTTGGTGGTTGTTGTATTACTCCTTATGGATACTCTGTGATGTTAAGAAAGTTAATGGATTTTGCTCAAGGTAAAGTTTTGCTTGCTTTGGAAGGAGGATATAATCTTCAATCCTTGGCAAATTCAGCTCATGCATGTGTGCAAGTCTTGCTAGAAGAAAAACCAATTGATGGATCTTCAGAAGCTTATCCATTTGAAGCGACGTGGCGTGTCATAAAAGATGTACGGCAAACATTGAGTGCCCATTGGCCAAGCCTTTCAGATGAATTACCCAAGAAGTTAACAAGCCTTAAAGCACCTCCTCCTCAGGTAATAGCCTCGAGCTCTGATTCTGAAACTGATGATACTGAGGACGCTTTGAAGGATATTATACAACCACTCTCGGAACTGAAGGTTGATGAGGGCCAAGGTCAGAAGGGCAATACTTCAGCCATGTGGAGACCAGAGCTCAGATTGGTTGATGTGTGGTATGCAACCTTTGGTTCTAATATGTGGAAGCCAAGATTTCTCTGCTATATCCAAGGTGGACAGGTGGAAGGTATGCAAAAGTCTTGTTCTGGTTCCATGGATATAAGCCCACCAAAGGATGTCTTGTGGAAGAATATCCCTCATAGATTATTCTTTGGCTATGATTATACCCAAACGTGGGGTCCTGGAGGAGTTGCTTTCCTTAATCCTGAAAGTAAAGCACAGGATAAAGCTTACATCTGCATGTATAAAATTACGCTAGAGCAGTTTAATGATGTTCTATTTCAGGAGAACAGGTTAAGCTGTGACAGTAATTTTCCTCTGTTTGATTTAGAAGCTCTGAAAACTATCAAAAGTACAGGATCAGTCTCTTTAAAAGCTGTTAAGGGCTGGTATCATAATGTAGTTTTTCTGGGCGAGGAGCAAGACATTCCCATCTTAACCATGACGTGTGACCTTTCCAATGTGGAGGGCTTCAGATCTGGACAACTACCATTGCGTGCTCCCGCCAAGGAATACGCGAATACCTTGATTAGGGGGCTTTCAGAAGGGGAACAGCTTTCTGAAGCTGAAGCAATGACCTATATTGAGGAAGCCGCGAAAACCCCTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23632.p1 GENE.S_Transcript_23632~~S_Transcript_23632.p1 ORF type:3prime_partial len:645 (+),score=116.65,Hist_deacetyl|PF00850.15|6.4e-90 S_Transcript_23632:166-2097(+)
MEGEAKSERVTKRVGLVYDERMCKHDTPDGDEHPESPLRIRAIVKKLLDSGLLSRCALLNAKEAEDKFIELVHSKYHVDLIKNISSKQFDSRRDRIASKFNSIYLNKGSSQAAYLAAGSVLEAAERVAKGDLDSAFAIVRPPGHHAEENEPMGFCLFNNVAIAASYLLNERPELGIHKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGCFYPGTDDGSHIMIGEGPGEGYNINIPWEHGHCGDPDYFAVWDHVLIPVAKEFNPDFIIVSAGFDAAVRDPLGGCCITPYGYSVMLRKLMDFAQGKVLLALEGGYNLQSLANSAHACVQVLLEEKPIDGSSEAYPFEATWRVIKDVRQTLSAHWPSLSDELPKKLTSLKAPPPQVIASSSDSETDDTEDALKDIIQPLSELKVDEGQGQKGNTSAMWRPELRLVDVWYATFGSNMWKPRFLCYIQGGQVEGMQKSCSGSMDISPPKDVLWKNIPHRLFFGYDYTQTWGPGGVAFLNPESKAQDKAYICMYKITLEQFNDVLFQENRLSCDSNFPLFDLEALKTIKSTGSVSLKAVKGWYHNVVFLGEEQDIPILTMTCDLSNVEGFRSGQLPLRAPAKEYANTLIRGLSEGEQLSEAEAMTYIEEAAKTPL

Click here to download the sequence:
Link to NCBI Protein BLAST