Transcript Information: S_Transcript_236330.p1


Annotated TAIR IDAT3G08880.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2703169-2704165 | Forward length=201
E-Value9E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7072837541545
Replicate 23.0734234209473
Replicate 32.9361569884339
Condition 2: 8 Hour
Replicate 14.0316658310998
Replicate 23.4503846160772
Replicate 34.1359107293247
Condition 3: 24 Hour
Replicate 12.0649392354293
Replicate 23.0443925998079
Replicate 33.7644842395696


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236330.p1 GENE.S_Transcript_236330~~S_Transcript_236330.p1 ORF type:complete len:201 (+),score=56.48,Use1|PF09753.5|1.1e-05 S_Transcript_236330:270-872(+)
ATGGGGGAAAATCCACAGGCAATTGATGTAAAGCAACTGCTATCCTACTGTGACGACCTTGCTGGAGTTCTCAGAGACAAGAAAGACTTTAATTTGTTGACTTACTGCCTTGACCGCTCCAAGTTTCTTCATTCGCTTTCTGATTCTGATTTCAACTCTATCCAGCTCGCCATTTCAGATTATCAGAAAAAAATAGAAGATTGCAAGAAGAAAATAGAAGCAGCAAAGTCTGAAGTGGTTGCTGATGAAGAAATAGACAGTCTTCAAAAAGATCTTGATGAGGAACTGAAAAACGAGGAGTTGCTTCGAGAGGAGCTCAGAGTTATTGTTGGCAAAATCAATCAGTTAGATCACCAACGACGGTCAATTGAAGAACAAAGGCAAGGTCTGAAGAAACTTGAAGAAGAAGAAGAGAAAGAACGGAGGAAACTCTCATTTTATGCATCTGTCACAAAGATAATTCCGGATGTGGAGAGTAAATCAAAAATTCGTGGACATATTGTGGAGCGTGACAGAAAAGTGGTGGATAAGTTTGAATTTGATCCAACTCAGGAAGATGCCTTTGACATGTGTAATAAAATCTGGAAGCTGATAAACCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236330.p1 GENE.S_Transcript_236330~~S_Transcript_236330.p1 ORF type:complete len:201 (+),score=56.48,Use1|PF09753.5|1.1e-05 S_Transcript_236330:270-872(+)
MGENPQAIDVKQLLSYCDDLAGVLRDKKDFNLLTYCLDRSKFLHSLSDSDFNSIQLAISDYQKKIEDCKKKIEAAKSEVVADEEIDSLQKDLDEELKNEELLREELRVIVGKINQLDHQRRSIEEQRQGLKKLEEEEEKERRKLSFYASVTKIIPDVESKSKIRGHIVERDRKVVDKFEFDPTQEDAFDMCNKIWKLINQ*

Click here to download the sequence:
Link to NCBI Protein BLAST