Transcript Information: S_Transcript_236333.p1


Annotated TAIR IDAT3G08880.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2703169-2704165 | Forward length=201
E-Value1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6341046926931
Replicate 23.7320141540075
Replicate 33.3949315178767
Condition 2: 8 Hour
Replicate 13.9255693618603
Replicate 24.4521091820351
Replicate 33.4996167709671
Condition 3: 24 Hour
Replicate 12.6083442973844
Replicate 23.2699031627566
Replicate 34.0154498555409


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236333.p1 GENE.S_Transcript_236333~~S_Transcript_236333.p1 ORF type:complete len:201 (+),score=49.01 S_Transcript_236333:273-875(+)
ATGGGGGAAAATCCACAGACAATCGATGTACAGCAACTGTTATCCTACTGTGACGACCTTGTTGGAGTTCTCAGAGAAAAGAGAGACTTTAATTTGTTAACTCACTGCCTTGACCGCTCCAAGTCTCTTCATTCGCTTTCTGATTCTGATTTCAACTCTATCCAGCTCGCCATTTCAGATTATCAGAAAAAAATAGAAGATTGCAAGAAGAAAATAGAAGCAGCAAAGTCTGAAGTGGTTGCTGATGAAGAAATAGACAGTCTTCAAAAAGATCTTGATGAGGAACTAAAAAATGAGGAGTTGCTTCGAGAGAAGCTCAGAGTTATTGTTGGGAAAATCAATCAGTTAGATCACCAACGACGGTCAATTGAAGAACAAAGGCAAGGTCTGAAGAAACTTGAAGAAGAAGAAGAGAAAGAACGGAGGAAACTCTCATTTTATGCATCTGTCACAAAGATAATTCCGGATTTGGAGACTAAATCAAAAATTCGTGGACATATTGTGGAGCGTGACAGAAAAGTGGTGGATAAGTTTGAATTTGATCCAACTCAGGAAGATGCCTTCGACATGTGTAATAAAATTTGGAAGCGGATAAACCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236333.p1 GENE.S_Transcript_236333~~S_Transcript_236333.p1 ORF type:complete len:201 (+),score=49.01 S_Transcript_236333:273-875(+)
MGENPQTIDVQQLLSYCDDLVGVLREKRDFNLLTHCLDRSKSLHSLSDSDFNSIQLAISDYQKKIEDCKKKIEAAKSEVVADEEIDSLQKDLDEELKNEELLREKLRVIVGKINQLDHQRRSIEEQRQGLKKLEEEEEKERRKLSFYASVTKIIPDLETKSKIRGHIVERDRKVVDKFEFDPTQEDAFDMCNKIWKRINQ*

Click here to download the sequence:
Link to NCBI Protein BLAST