Transcript Information: S_Transcript_23635.p1


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeOrtholog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value1.1E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8238875908712
Replicate 23.8663087809793
Replicate 33.9138925450728
Condition 2: 8 Hour
Replicate 14.9027826613344
Replicate 25.826751574977
Replicate 37.5393673200899
Condition 3: 24 Hour
Replicate 14.0739654098214
Replicate 24.8825574778626
Replicate 34.0144411512966


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23635.p1 GENE.S_Transcript_23635~~S_Transcript_23635.p1 ORF type:complete len:622 (+),score=107.41,Hist_deacetyl|PF00850.15|3.9e-91 S_Transcript_23635:166-2031(+)
ATGGAGGGAGAAGCGAAGTCAGAGAGAGTGACGAAACGCGTAGGGTTAGTGTACGACGAAAGGATGTGCAAGCATGATACTCCTGACGGCGATGAACATCCTGAATCTCCTCTTCGAATTAGGGCTATCGTTAAGAAGCTTCTCGATTCTGGCCTTCTTTCTAGGTGCGTTCTTTTGAATGCAAAAGAAGCCGAAGATAAATATATAGAGTTAGTTCATTCGAAAAATCATGTTGACTTGCTGCAGAATATAAGCTCCAAGCAGTTTGATTCTCGTAGGGACAGAATTGCATCTAAATTTAATTCCATTTATTTGAACAAAGGCTCATCACAAGCTGCTTATCTGGCTGCGGGCTCTGTCCTAGAGGCTGCAGAGAAAGTTGCCAAGGGGGATCTTCATTCTGCTTTTGCAATTGTGAGGCCTCCTGGGCATCATGCGGAAGAGAATGAGCCAATGGGTTTTTGCTTATTCAATAATGTAGCTATCGCAGCTAGTTATCTGCTGAATGAAAGACCAGAATTGGGCATTCACAAAATTTTGATTGTTGATTGGGACGTTCATCATGGTAATGGTACTCAAAAAATGTTTTGGAAGGACTCTCGTGTTCTTTTCTTCTCTGTTCACAGGCACGAGTTTGGATGTTTTTATCCTGGAACTGATGATGGCTCCCATATTATGATTGGAGAAGGGCCAGGAGAAGGATACAATATTAACATTCCTTGGGAACATGGCCACTGTGGTGATCCAGACTATTTTGCAGTTTGGGATCATGTATTGATTCCAGTTGCTAAGGAGTTCAACCCAGACTTTATTATAGTCTCCGCAGGGTTTGATGCAGCTGTTCGTGACCCTCTTGGTGGTTGTTGTATTACTCCTTATGGATACTCTGTGATGTTAAGAAAGTTAATGGATTTTGCTCAAGGTAAAGTTTTGCTTGCTTTGGAAGGAGGATATAATCTTCAATCCTTGGCAAATTCAGCTCATGCATGTGTGCAAGTCTTGCTAGAAGAAAAACCAATTGATGGATCTTCAGAAGCTTATCCATTTGAAGCGACGTGGCGTGTCATAAAAGATGTACGGCAAACATTGAGTGCCCATTGGCCAAGCCTTTCAGATGAATTACCCAAGAAGTTAACAAGCCTTAAAGCACCTCCTCCTCAGGTAATAGCCTCGAGCTCTGATTCTGAAACTGATGATACTGAGGACGCTTTGAAGGATATTATACAACCACTCTCGGAACTGAAGGTTGATGAGGGCCAAGGTCAGAAGGGCAATACTTCAGCCATGTGGAGACCAGAGCTCAGATTGGTTGATGTGTGGTATGCAACCTTTGGTTCTAATATGTGGAAGCCAAGATTTCTCTGCTATATCCAAGGTGGACAGGTGGAAGGTATGCAAAAGTCTTGTTCTGGTTCCATGGATATAAGCCCACCAAAGGATGTCTTGTGGAAGAATATCCCTCATAGATTATTCTTTGGCTATGATTATACCCAAACGTGGGGTCCTGGAGGAGTTGCTTTCCTTAATCCTGAAAGTAAAGCACAGGATAAAGCTTACATCTGCATGTATAAAATTACGCTAGAGCAGTTTAATGATGTTCTATTTCAGGAGAACAGGTTAAGCTGTGACAGTAATTTTCCTCTGTTTGATTTAGAAGCTCTGAAAACTATCAAAAGTACAGGATCAGTCTCTTTAAAAGCTGTTAAGGTAAGGGCACTAACTTTTAACGTGGACTATCGTTTCTTTGATAAGCATGAGACTAAAATTCAGTGTGGAAGACACGTGTCTCAGTGTCTCTTACAGCACAAGAAAAAAGGTATTGACCCTGGACTAGGAGTCCTTTTGATCATGTTGGCATTTTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23635.p1 GENE.S_Transcript_23635~~S_Transcript_23635.p1 ORF type:complete len:622 (+),score=107.41,Hist_deacetyl|PF00850.15|3.9e-91 S_Transcript_23635:166-2031(+)
MEGEAKSERVTKRVGLVYDERMCKHDTPDGDEHPESPLRIRAIVKKLLDSGLLSRCVLLNAKEAEDKYIELVHSKNHVDLLQNISSKQFDSRRDRIASKFNSIYLNKGSSQAAYLAAGSVLEAAEKVAKGDLHSAFAIVRPPGHHAEENEPMGFCLFNNVAIAASYLLNERPELGIHKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGCFYPGTDDGSHIMIGEGPGEGYNINIPWEHGHCGDPDYFAVWDHVLIPVAKEFNPDFIIVSAGFDAAVRDPLGGCCITPYGYSVMLRKLMDFAQGKVLLALEGGYNLQSLANSAHACVQVLLEEKPIDGSSEAYPFEATWRVIKDVRQTLSAHWPSLSDELPKKLTSLKAPPPQVIASSSDSETDDTEDALKDIIQPLSELKVDEGQGQKGNTSAMWRPELRLVDVWYATFGSNMWKPRFLCYIQGGQVEGMQKSCSGSMDISPPKDVLWKNIPHRLFFGYDYTQTWGPGGVAFLNPESKAQDKAYICMYKITLEQFNDVLFQENRLSCDSNFPLFDLEALKTIKSTGSVSLKAVKVRALTFNVDYRFFDKHETKIQCGRHVSQCLLQHKKKGIDPGLGVLLIMLAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST