Transcript Information: S_Transcript_236528.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25956223008841
Replicate 30.21697336568942
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20.7895946578727
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236528.p1 GENE.S_Transcript_236528~~S_Transcript_236528.p1 ORF type:5prime_partial len:85 (+),score=3.64 S_Transcript_236528:1-255(+)
GTTAAATCCCAGTGGTTCTTCAACTGTTTCTTGTCAATGTTGAAGTTCGGTTTCTTATTCAATGCTTCAAGAACATTATTCCATCCATCTCTATTGAAAGATGGTCCAGGCTTATTACCATTTAATGTCTCTCGCACACATAAATCGACAAAGTATTCATGCATTTCAGGTGACCATAGCTTTTTACCTCTTATCACTGGTCCATTATGCCTCTCCATTTCATCTGCCGATCTAGGGAATTTGGGGAGCCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236528.p1 GENE.S_Transcript_236528~~S_Transcript_236528.p1 ORF type:5prime_partial len:85 (+),score=3.64 S_Transcript_236528:1-255(+)
VKSQWFFNCFLSMLKFGFLFNASRTLFHPSLLKDGPGLLPFNVSRTHKSTKYSCISGDHSFLPLITGPLCLSISSADLGNLGSL*

Click here to download the sequence:
Link to NCBI Protein BLAST