Transcript Information: S_Transcript_236770.p3


Annotated TAIR IDAT1G62040.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8C
Annotation TypeOrtholog
Chromosome Positionchr1:22932782-22934253 | Forward length=133
E-Value1.2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.21697336568942
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20.2631982192909
Replicate 30.25077467770566
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.59345986835567


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236770.p3 GENE.S_Transcript_236770~~S_Transcript_236770.p3 ORF type:3prime_partial len:85 (+),score=7.68,Atg8|PF02991.12|1.5e-08 S_Transcript_236770:366-617(+)
ATGGTCATTTCCCCTCTTTCGGTTTTTTTTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTTTTTTGGGGGGGTGGAAGATCGGGTGACCACAGTATACTCTGTGTGTATCCCATTCCCCCCCCCCCCCGAGGGCTTAGGAAACATCTGATCATAGTTTTCTGTGCTTTGCAGGTGATTGTGGAGAAGGCTGAGAGAAGTGATATCCCAAATATAGACAAGAAAAAGTACTTGGTGCCAGCTGATTTAACAGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236770.p3 GENE.S_Transcript_236770~~S_Transcript_236770.p3 ORF type:3prime_partial len:85 (+),score=7.68,Atg8|PF02991.12|1.5e-08 S_Transcript_236770:366-617(+)
MVISPLSVFFLSFFSFSFSFFWGGGRSGDHSILCVYPIPPPPRGLRKHLIIVFCALQVIVEKAERSDIPNIDKKKYLVPADLTV

Click here to download the sequence:
Link to NCBI Protein BLAST