Transcript Information: S_Transcript_236811.p1


Annotated TAIR IDAT5G60600.1
Annotated Gene Name4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Annotated Gene Symbol(s)GCPE, ISPG, CSB3, CLB4, HDS
Annotation TypeHomolog
Chromosome Positionchr5:24359447-24363274 | Forward length=741
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.27578486946893
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.55929621599317
Replicate 30.26644809506227
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236811.p1 GENE.S_Transcript_236811~~S_Transcript_236811.p1 ORF type:complete len:80 (+),score=5.93,GcpE|PF04551.10|4.9e-12 S_Transcript_236811:1-240(+)
ATGGGTTGCATCGTGAATGGTCCTGGGGAAATGGCTGATGCGGACTTTGGATATGTTGGCGGTGCTCCTGGAAAAATTGACTTATATGTAGGCAAGGTAAGTCTTTTTTTCACTGCCCTAGTTAAAAACTGTGCTATGTTTGATTGTTACAATACTCGAGTTGCTGCACTTAGAATCATTTTAGTGCAACCTAGATATGTAGATCCTTCGATTCTAAATTTTATGCTTCTGTCTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236811.p1 GENE.S_Transcript_236811~~S_Transcript_236811.p1 ORF type:complete len:80 (+),score=5.93,GcpE|PF04551.10|4.9e-12 S_Transcript_236811:1-240(+)
MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKVSLFFTALVKNCAMFDCYNTRVAALRIILVQPRYVDPSILNFMLLSV*

Click here to download the sequence:
Link to NCBI Protein BLAST