Transcript Information: S_Transcript_23688.p1


Annotated TAIR IDAT1G44920.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16983229-16984408 | Reverse length=258
E-Value1.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.211353921931
Replicate 239.513149242378
Replicate 345.367845557568
Condition 2: 8 Hour
Replicate 114.043549721039
Replicate 216.681448114639
Replicate 315.151334186119
Condition 3: 24 Hour
Replicate 152.290714139506
Replicate 250.855382073755
Replicate 352.6411310058


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23688.p1 GENE.S_Transcript_23688~~S_Transcript_23688.p1 ORF type:complete len:287 (+),score=61.37,DUF3054|PF11255.4|2e-25 S_Transcript_23688:108-968(+)
ATGCAGGCACTAAGCCAAGCATTGTCAAGCAGAGGGCTTTGCAGCAGCCAGGGCTGCTGTTGCGGCTACTCCACCACCACCCGCTGCTCCTTATCTTCCACCGCCGCCACCCGTTCTGTTTCCTTTTCTCTCTCCTCCTCATCTCCCAAAATTTCCGGTCCTGCCACCGCTCGTTTCTCCAAACCCAACCCCAAAACTCGTCGTTTCTCTCGCATCTCTGCAAACTTCCAAAACGGCACCGTTCCCAATCCCACCACCAATGATAATCAACAGCAACAAGCTCCTTCAACTTCAAGCTCAACTTCTTCTTCAGCTCCGGTTATTTTGGGCCCAGAGAGTGTTCCTCTGGAAGGTGTTATCCAATTCGACAAGCCCAATTCCTCTTCTCGTATTCAGAAATGGGGGAGAATTGGGTTATTGGCCAGTGGTGATGTTTTGGCTTTGCTCATGTTTGCTGCAATTGGGAGGTTTAGTCATGGTTTCCCTGTTTTCGACCCTGAAACCCTGCGTACTGCTGACCCATTGATTGCCGGGTGGTTTTTGAGTGCATACTTTCTAGGAGGTTATTCTGAGGATGGTAGAGGAATGAATGGTTTGTCTAAGGCTATTGTAGCTGCTGCAAAATCCTGGGCCTTAGGTGTACCTATTGGATTGGGCATACGAGCATTATCTTCAGGGCATTTTCCTCCCACCAATTTTATTTTGGTGACACTGGGAAGTACAGCAGTTCTGCTAATTGGTTGGAGAACAGTGCTATTCCAGCTACTCCCTAGTGACAAGGGCAAGAAAGATGACATGTACAGGCGTGGAAATCCATTTGAACTGTTTGAGTTACTAACTTCACTGGTCAGGAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23688.p1 GENE.S_Transcript_23688~~S_Transcript_23688.p1 ORF type:complete len:287 (+),score=61.37,DUF3054|PF11255.4|2e-25 S_Transcript_23688:108-968(+)
MQALSQALSSRGLCSSQGCCCGYSTTTRCSLSSTAATRSVSFSLSSSSPKISGPATARFSKPNPKTRRFSRISANFQNGTVPNPTTNDNQQQQAPSTSSSTSSSAPVILGPESVPLEGVIQFDKPNSSSRIQKWGRIGLLASGDVLALLMFAAIGRFSHGFPVFDPETLRTADPLIAGWFLSAYFLGGYSEDGRGMNGLSKAIVAAAKSWALGVPIGLGIRALSSGHFPPTNFILVTLGSTAVLLIGWRTVLFQLLPSDKGKKDDMYRRGNPFELFELLTSLVRRW*

Click here to download the sequence:
Link to NCBI Protein BLAST