Transcript Information: S_Transcript_23690.p1


Annotated TAIR IDAT1G44920.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16983229-16984408 | Reverse length=258
E-Value1.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1266.31546880641
Replicate 2267.21343728892
Replicate 3268.54423029048
Condition 2: 8 Hour
Replicate 139.827209790882
Replicate 240.924113365354
Replicate 337.581250481256
Condition 3: 24 Hour
Replicate 1358.88022877405
Replicate 2349.03849187267
Replicate 3366.11511146939


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23690.p1 GENE.S_Transcript_23690~~S_Transcript_23690.p1 ORF type:complete len:287 (+),score=62.47,DUF3054|PF11255.4|2e-25 S_Transcript_23690:140-1000(+)
ATGCAGGCACTAAGCCAAGCATTGTCAAGCAGAGGGCTTTGCAGCAGCCAGGGCTGCTGTTGTGGCTACTCCACCACCACCTCCTGCTCCTTCTCTTCCACCACTGCCACCCGTTCTGTTTCCTTTTCTCTCTCCTCATCATCTCCCAAAATTTACCGTCCTGCCACCACTCGTTTCTCCAAACCCAACTCCAAAACTCGTCGTTTCTCTCTCATCTCTGCAAACTCCCAAAAAGGCACCGTTCCCAATCACACCGCCAATGATAATCAACAGCAACAAGCCCCTTCAACTTCAACCTCAACTTCTTCTTCATCTCCGGTTATTGTGGGCCCAGAGAGTGTTCCTTTGGAAGGTGTTATCCAATTCGACAAGCCCAATTCCTCTTCTCGTATTCAGAAATGGGGGAGAATTGGGTTATTGGCCAGTGGTGATGTTTTGGCTTTGCTCATGTTTGCTGCAATTGGGAGGTTTAGTCATGGTTTCCCTGTTTTCGACCCTGAAACCCTGCGTACTGCTGACCCATTGATTGCCGGGTGGTTTTTGAGTGCATACTTTCTAGGAGGTTATTCTGAGGATGGTAGAGGAATGAATGGTTTGTCTAAGGCTATTGTAGCTGCTGCAAAATCCTGGGCCTTAGGTGTACCTATTGGATTGGGCATACGAGCATTATCTTCAGGGCATTTTCCTCCCACCAATTTTATTTTGGTGACACTGGGAAGTACAGCAGTTCTGCTAATTGGTTGGAGAACAGTGCTATTCCAGCTACTCCCTAGTGACAAGGGCAAGAAAGATGACATGTACAGGCGTGGAAATCCATTTGAACTGTTTGAGTTACTAACTTCACTGGTCAGGAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23690.p1 GENE.S_Transcript_23690~~S_Transcript_23690.p1 ORF type:complete len:287 (+),score=62.47,DUF3054|PF11255.4|2e-25 S_Transcript_23690:140-1000(+)
MQALSQALSSRGLCSSQGCCCGYSTTTSCSFSSTTATRSVSFSLSSSSPKIYRPATTRFSKPNSKTRRFSLISANSQKGTVPNHTANDNQQQQAPSTSTSTSSSSPVIVGPESVPLEGVIQFDKPNSSSRIQKWGRIGLLASGDVLALLMFAAIGRFSHGFPVFDPETLRTADPLIAGWFLSAYFLGGYSEDGRGMNGLSKAIVAAAKSWALGVPIGLGIRALSSGHFPPTNFILVTLGSTAVLLIGWRTVLFQLLPSDKGKKDDMYRRGNPFELFELLTSLVRRW*

Click here to download the sequence:
Link to NCBI Protein BLAST