Transcript Information: S_Transcript_236928.p1


Annotated TAIR IDAT4G23030.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12072857-12074365 | Forward length=502
E-Value6E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23761608245697
Replicate 20.49247298119453
Replicate 30.08233364323036
Condition 2: 8 Hour
Replicate 10.42841185904955
Replicate 20.049937162142247
Replicate 30.28548010185243
Condition 3: 24 Hour
Replicate 10.048760900648648
Replicate 20.050588865125775
Replicate 30.16889761878426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_236928.p1 GENE.S_Transcript_236928~~S_Transcript_236928.p1 ORF type:5prime_partial len:448 (+),score=3.35,MatE|PF01554.14|1.3e-15,MatE|PF01554.14|2.8e+02,MatE|PF01554.14|4.3e-39,MatE|PF01554.14|1.1e+02 S_Transcript_236928:1-1344(+)
GGTGCCCAGAAGCATTCGCTTCTGGGACTGACCCTTTATAGAACCATTCTATTTCTTCTTCTTACATCCCTTCCAATTTCACTGCTTTGGCTCAACATGGACCGGATCCTGCTCCTATGTGGGCAGGACTCGGCCATAGCCAGTCAAGCACAGGCTTACCTGGTTTACTCCCTTCCGGACCTTCTAGCCCAATCCATCCTCCACCCTCTGAGAATCTACCTCCGGACCCAATCCATCACCCTCCCCCTCACCTTCGCTGCAGCCATCGCCATCACCCTTCACCTCCCACTCAACTGGCTCTTGGTCATCAAGCTCAACCTCGACGTGAAAGGCGTGGCGCTAGCCAGCGTGTGCACCAACTTCATCATGCTATTCCTGCTCTTCACCTACATGCTCTTCGCCCCTTCCTGCAGAAAGGGGCTGGCAGAAGCCTCGGCAACAAAGCTGAGCGCTTTACTGTCAAAAGACGGGCTAGGACGGCTAGCCCGTCTTGCAATCCCGAGCTGCATTTCGGTCTGCCTGGAGTGGTGGTGGTACGAGATCATGATCCTCCTGTGCGGTCTCCTCCACAACCCGCAAGCCACAGTCGCCTCAATGGGGATCCTCATCCAAACCACTGGCCTCATCTACATCTTCCCTTCCTCCTTGAGCGTCAGCCTCTCCACCAGGGTCGGCAACGAGCTCGGGGCGGGCAGGCCCAAGCGGGCTAAACGGGCTGCAGTGACGGGCCTGCTCTTCAGTTTCCTGCTGGGCTTCTCGGCGCTCTTCTTCACCTTCATGGTGAGGGAGAAGTGGGCCAGTATGTTCACCAAGGACGTGGAGATCATCCGATTGACCACATTGGTACTGCCCATAATTGGGCTATGTGAGCTAGGGAATTGCCCACAAACCACCGGCTGCGGGGTGCTGCGAGGCACGGCCCGGCCCAAAGTGGGAGCCCACATTAACTTGGGGTGCTTCTACTTGGTGGGGATGCCGGTGGCAGTATGGCTGGGGTTCTTCGCCGGGTTCGACTTCCAAGGGTTGTGGCTCGGAATGCTTGCAGCCCAGGGCTCGTGTGTGGTGACCATGATGGTGGTCTTGAATAGGACTAATTGGGAATTTGAAGCCCAAAAGGCTAAACAGCTCACTGATCATTCCCACCACCCTAACCAAAAAAGATCAATCGCCATTACTAGTTTAATTGTTTTTTTTTATTATTATTTCTTTAAAAATATCTTCAATGGCGGGCGAATTCTTTGTGCAGCTAACAGGGGGCAGCGGAGAAAATCGTTTTTACTACTTTCTTTGTTTTCTTATTTGGGGGCGGGGATGGTAAATTTTGAGCTGACTTTTAAGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_236928.p1 GENE.S_Transcript_236928~~S_Transcript_236928.p1 ORF type:5prime_partial len:448 (+),score=3.35,MatE|PF01554.14|1.3e-15,MatE|PF01554.14|2.8e+02,MatE|PF01554.14|4.3e-39,MatE|PF01554.14|1.1e+02 S_Transcript_236928:1-1344(+)
GAQKHSLLGLTLYRTILFLLLTSLPISLLWLNMDRILLLCGQDSAIASQAQAYLVYSLPDLLAQSILHPLRIYLRTQSITLPLTFAAAIAITLHLPLNWLLVIKLNLDVKGVALASVCTNFIMLFLLFTYMLFAPSCRKGLAEASATKLSALLSKDGLGRLARLAIPSCISVCLEWWWYEIMILLCGLLHNPQATVASMGILIQTTGLIYIFPSSLSVSLSTRVGNELGAGRPKRAKRAAVTGLLFSFLLGFSALFFTFMVREKWASMFTKDVEIIRLTTLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGAHINLGCFYLVGMPVAVWLGFFAGFDFQGLWLGMLAAQGSCVVTMMVVLNRTNWEFEAQKAKQLTDHSHHPNQKRSIAITSLIVFFYYYFFKNIFNGGRILCAANRGQRRKSFLLLSLFSYLGAGMVNFELTFKN*

Click here to download the sequence:
Link to NCBI Protein BLAST