Transcript Information: S_Transcript_23697.p1


Annotated TAIR IDAT3G47470.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex I subunit A4
Annotated Gene Symbol(s)LHCA4, CAB4
Annotation TypeOrtholog
Chromosome Positionchr3:17493622-17494773 | Reverse length=251
E-Value1.4E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12246.3696399743
Replicate 22591.2396132292
Replicate 33026.5115396874
Condition 2: 8 Hour
Replicate 11077.01683558
Replicate 21104.8319695294
Replicate 31173.471245333
Condition 3: 24 Hour
Replicate 12853.6179350273
Replicate 22749.7858688366
Replicate 32773.0236598736


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23697.p1 GENE.S_Transcript_23697~~S_Transcript_23697.p1 ORF type:complete len:252 (+),score=55.67,Chloroa_b-bind|PF00504.17|3.4e-47 S_Transcript_23697:486-1241(+)
ATGGCAGCTGTCACTACACAAGCTTCGATCGCCGGATTCCGGCCATGCGCATCGAAATCGAGATTCTTGAGTGGTGTTCCTGGCAAGCTTAACAAGGAAAGTGCCATAAGGTTGCCCTCATCTTCATCATCTACTTCTCTAAGAGTTGAAGCCAAGAAAGGGGAATGGTTGCCTGGATTGGCTTCTCCAAACTACCTCAATGGCAGTCTTCCAGGAGACAATGGGTTTGATCCGTTGGGACTGGCAGAGGACCCAGAGAACTTGAAGTGGTTCGTACAAGCGGAGCTAGTGAATGGGAGGTGGGCAATGCTAGGGGTGGCAGGAATGCTTCTACCAGAAGTGTTTACAAAGATGGGGATCATCAATGTCCCAGCATGGTATGATGCAGGCAAGTCAGAGTACTTTGCCTCTTCATCAACCTTGTTTGTGATTGAATTCATCTTGTTTCACTATGTGGAGATTAGAAGATGGCAAGACATCAAGAACCCTGGAAGTGTTAACCAAGACCCTATTTTCAAGCAATACAGCTTGCCTCCTAATGAAGTTGGTTACCCTGGTGGTATCTTTAACCCTCTTAACTTTGCACCTACTCTTGAAGCCAAGGAGAAGGAGCTTGCTAATGGGAGATTGGCGATGTTGGCATTCTTGGGATTTATTGTTCAACACAATGTGACCGGAAAGGGAGCATTCGACAACCTTTTGCAGCACTTATCAGACCCATGGCACAACACCATTGTCCAGACATTGGGCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23697.p1 GENE.S_Transcript_23697~~S_Transcript_23697.p1 ORF type:complete len:252 (+),score=55.67,Chloroa_b-bind|PF00504.17|3.4e-47 S_Transcript_23697:486-1241(+)
MAAVTTQASIAGFRPCASKSRFLSGVPGKLNKESAIRLPSSSSSTSLRVEAKKGEWLPGLASPNYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKMGIINVPAWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGAFDNLLQHLSDPWHNTIVQTLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST